Ciona intestinalis (yellow sea squirt): 100182870
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Entry
100182870 CDS
T01056
Name
(RefSeq) prominin-1-like isoform X1
KO
K06532
prominin 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100182870
04090 CD molecules [BR:
cin04090
]
100182870
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100182870
CD molecules [BR:
cin04090
]
Proteins
100182870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Prefoldin
Baculo_PEP_C
Death_Lrrd1
Cnd1
Motif
Other DBs
NCBI-GeneID:
100182870
NCBI-ProteinID:
XP_026694420
LinkDB
All DBs
Position
1:8708468..8728388
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AA seq
864 aa
AA seq
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MSTNLTYPDLPENVYSAVTVDLSIVSLQHLFVMTTSFINLVFRPFSAIEEFIYSIATSGT
TNFLGDLLKNWQTSLPGRLFVTYKLASFEAGFMACFVAGCLFIILVPLVGAIMCCCRTCC
DNCGGEMIQSKSRVQSKWRYCFFASLLIITVFIMIPCVFVFLTNEWVTQVVKVIPDKTVK
VFNDFSSYLELIPTQFNFIVNQYYTLDQGLSTDIQNLGTSVGVPIRDTFIALATPALTLL
TGISNDADKSLTELVSIQQSTDVLINGSNNLDSQLSSLRSRMASSLNTTECRGDMYCRGV
LISIDSLTTGGDFSALQSVQAQITEINDTLTQYDINAEINKVMKQLNDIPELVTNGSANV
TKNMLSTLATINETMSKAISQLPLSSLDPLKQEMENINSTIYSIAYDYSTKYDIYRYAAG
IVLGSIVALICALYLLGMLCGGCGFKSDRNPADRSTLSNCGGISIMAGVGVSFIFGWILM
LLVTLTFTVGGHGERYVCQNLEYPYEGIKFLDDVLWKTYGSLLGIKLYTDSYVPLDFSGV
LTACEGNSSIYTALQLEELFNVTEFIQSATENLNSFKTQLSDLTVDLSSLKAYTPEIANA
LNALKQTGLDGINFDSYLNATAQGITTVNFTFYAQFLNNSADNMTVPGATAPILNLATEI
RKFSYEVTLIQTMYVDPLTPALNTLTTDINSLQKTATGLNASIDETAAALQTLDSVIQTN
GSALVSVEINKYADTLILSVNQYAAWFLDQVTNHFGQCYPVVLVYNQFVSILCSYFMDIL
NGLWFCLGWITFFLIPGAIFGMKLAKYYRRLQDMESYNDNHWNDMEMDAFNRSNNNGQQQ
QKSSGKFSFLSPQRSAKIHPGEYY
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaatttaacctaccctgacctgccggagaatgtgtacagtgcggtaaccgtg
gacctaagcattgtttcattgcaacatctttttgtcatgaccacttcgtttattaatctg
gtgtttcgtccttttagtgctattgaagagttcatatactcgatagctacttccggaacc
actaatttcttgggagacttactgaagaattggcaaacatctttgccaggcagactgttt
gtcacatataagcttgcatcatttgaagctgggttcatggcttgtttcgtcgctgggtgt
ttgttcatcatcctcgttccattagttggcgctataatgtgttgttgccgaacatgctgt
gacaactgtggtggggaaatgatccaatcaaaaagtcgagtgcagagtaaatggagatac
tgtttctttgcgtcccttctcataatcactgtgtttattatgataccgtgtgtgtttgtc
ttcctaaccaatgaatgggtcacacaagttgtgaaagtaattcccgacaaaacagtcaaa
gtttttaacgactttagcagttatttggaactcattcctactcagttcaactttatcgtt
aaccaatattacacacttgatcaaggtctttcaacagacatacaaaatttgggtacctca
gttggcgttccaatcagagatactttcattgcacttgccactcctgcactcactctactt
actggaatatccaatgacgctgataaaagtttgacagaacttgtcagcatccaacagtca
accgacgttctcataaatggctccaacaaccttgacagccaacttagttctttgagatca
agaatggcatcctcattaaacacaactgagtgtaggggggatatgtactgtcgtggcgtg
cttatatctattgattccttaaccactggtggtgacttctctgcactccagagcgtgcag
gcgcagattaccgaaataaatgacacgttgacgcaatatgacatcaatgctgaaattaat
aaagttatgaaacaacttaatgatattccagaactcgtaaccaatggcagtgctaatgtt
acaaaaaatatgttgagtacattagcgacaatcaatgaaaccatgagtaaagccataagt
cagttgcccctctcatcactggaccctttaaaacaagaaatggaaaatattaactcaacg
atatatagtattgcttatgactatagtacaaaatatgacatatacaggtatgctgctggg
atagtcctcggttctattgtggctttaatttgcgctctgtacctccttgggatgttatgt
gggggttgtggcttcaagtcagacagaaacccagccgacagatccactttgtcaaactgt
ggtggcatctcaattatggctggtgtgggggtatcctttatatttggttggattctgatg
ttgttggtgactctcaccttcacagtgggtgggcatggggagagatatgtttgccagaac
cttgagtatccttatgaaggaattaagtttttggacgatgttttatggaaaacatatggg
agtcttcttggtatcaaactatatactgattcatacgtaccacttgactttagtggtgta
ttaactgcatgtgaaggaaattcttcaatctacaccgctctccaacttgaagaattattt
aatgtcaccgagtttattcagagcgcaacagaaaatctgaacagtttcaaaacccaactt
tctgatttaacagttgacctctcctctttaaaagcttacactcctgagatagcgaatgct
cttaatgctttgaaacagacaggtcttgatgggatcaattttgattcttatttaaatgca
acagcgcaaggcattaccacagtcaactttacattctatgctcaatttctaaacaactct
gcagacaacatgacagtgccaggtgcaactgccccaatacttaatctagcaactgaaatt
cgcaagttctcctatgaagtaacattgatacaaaccatgtacgttgatcctctcacacct
gcccttaatacacttaccacggatataaactccctgcagaaaactgctactggattgaat
gcatccatagatgagacagcagctgcactgcagacattagacagtgtcatacaaactaat
ggatcagctttggtttcagtagaaatcaataaatatgctgacactctcattttgagtgtc
aaccaatatgctgcttggtttcttgatcaggttaccaatcactttggacaatgttatccc
gtcgtgttggtttataatcagtttgtgtccatactctgcagttatttcatggatatcctg
aatggtctctggttctgccttggttggattactttcttcttgattcctggtgccatcttt
ggaatgaaacttgccaaatattacagacggcttcaagacatggagagctataatgataac
cattggaatgatatggagatggatgcattcaacagaagcaacaataacggacagcaacag
cagaagtcttcaggaaagttcagttttctatctccacaaagatctgctaaaattcacccc
ggggaatattactga
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