Ciona intestinalis (yellow sea squirt): 100182920
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Entry
100182920 CDS
T01056
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100182920
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100182920
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100182920
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100182920
03036 Chromosome and associated proteins [BR:
cin03036
]
100182920
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100182920
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100182920
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100182920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
100182920
NCBI-ProteinID:
XP_009859964
LinkDB
All DBs
Position
10:complement(2508793..2526214)
Genome browser
AA seq
457 aa
AA seq
DB search
MSMPGLSLEKDQAFHRKSVHKLQAQRRSQSSSNFNKDGKKELTPLPLIKDAVPPEQMDLF
MKKLDQCSVIFNFMETIEDIQGKEIKRASLNEVVDYISSAQGSLSEPVYAPIINMISINI
FRTLPPSDSVEFDPEDDDPTLEASWPHLQLVYEFFLRVMESPDFQPSIAKKHIDQKFVLH
LLELFASEDPRERDFLKTVLHRIYGKFLGLRAFIRRHMNNIFLTFIYETEQFAGIPELLE
ILGSIINGFALPLKSEHRQFLMKVLIPLHKTRALAMFHAQLAYCIVQFLEKDSTLTRQVL
QGILKYWPQTCSSKEVMFLGELEEILDVIEPAQFAQVLPDIFNQLAKCVSSPHFQVAERA
LYFWNNEYILSLIEENSVSILPLMFPSLYQISKEHWNQTIVALVYNVLKTFMEMNSQLFE
SLTASYKAERQKEVKKQKERDELWKKLDDLCVKKKRI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcccggactttctctggagaaggatcaggctttccacagaaagtctgtgcat
aagttacaggcacagcgtagatctcaaagctcgtcgaactttaacaaagatggaaaaaaa
gagctgacaccgttaccactaataaaagatgctgttccaccagaacaaatggatttgttc
atgaagaaactggaccaatgctctgtgatatttaactttatggagactatagaagatata
cagggaaaggaaataaagagagctagtttaaatgaagttgtggattacatctcctctgct
cagggatctttatcagaacctgtgtatgctcctatcataaacatgatctcaattaacata
ttccgcacactgccaccaagtgacagtgttgaatttgaccctgaagatgacgatccaaca
ttagaagcatcatggccacatcttcagcttgtgtacgaattcttcctacgagtaatggag
tcacccgacttccaaccttcaattgcaaagaaacatatcgatcaaaagtttgttctgcat
ttgctggaactgtttgcaagtgaagaccctcgcgaacgagatttcctcaaaacagttctg
catcgaatttacggaaagtttcttggtttacgagcatttattcgtcgccacatgaacaac
atttttctcacgtttatttacgagaccgaacaatttgctgggatacctgagctccttgaa
atactgggaagcattatcaatggttttgcgttacctctcaagtcagaacatcgtcagttc
ctcatgaaggttctcatacctctacataaaacaagagcattagcaatgttccacgctcaa
ctagcctattgcattgttcagtttctggagaaagattccacacttacaagacaggttctg
cagggaatactaaagtactggccacagacatgcagctcaaaagaagttatgtttctcggt
gaacttgaagaaatacttgacgtaatcgaacctgctcaattcgcgcaagtgttgccagat
attttcaaccagcttgccaaatgtgtttcaagtccccactttcaggtcgcagagagagct
ctctacttttggaacaacgaatatatcttgagtttaatcgaggagaactcagtctccatt
ctcccgcttatgttcccaagtctatatcaaatttcaaaagaacattggaaccagacaatc
gtagccttggtatataacgtcctaaagacctttatggaaatgaacagccagctgtttgaa
tcgctcaccgcatcttacaaagctgaacgacaaaaggaggttaaaaagcagaaagagcga
gacgaactctggaagaaattggacgacctctgcgttaagaagaaacgcatttag
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