Ciona intestinalis (yellow sea squirt): 100182924
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Entry
100182924 CDS
T01056
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100182924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100182924
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100182924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
PPP1R21_helical
PhaP_Bmeg
DUF1664
FliJ
Motif
Other DBs
NCBI-GeneID:
100182924
NCBI-ProteinID:
XP_002125735
Ensembl:
ENSCING00000005029
UniProt:
F6TX13
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All DBs
Position
14:1138420..1144951
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AA seq
478 aa
AA seq
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MAFKGFGTSNTGSGGGFSFGASSSTAATKTTQSSTGFSFGAPATASTGLGFGAKPTVSAP
SLGANQSKPAATGFSLGGSATTKPTLGFGQTASTASTASALTLGSTQPQTTKPAFKGLGG
VDLTSTASTSNGNGNKNNGISQAVKDQGVPEEICKDVKAFESYVQKQKSESNEVGKFSVR
SLQKINEEINSLSVAVGTISSAVQRNKAAVESIRNEFTNQLKNMEIAHRTQDTPAALQHE
NIAPIKYFIDLVSEFSISMQSYRHQMEELENHLHSLAQPSGMNPQDLSMALCKMQESFIT
LASNLHSIHDSVKHIKEQYLAYRKVVHGDHTDIFKQNIPVPAKSKKIEGPSAFSNLSNVA
ALAMASMLQQPQQQQQQAPPQQGFLGQTKTTNTLFGGNASGSLFGSTKPTVTTGSLFGSK
PTLSTTGFGGFGSTNTLKPALSAGLATSTSGNMFFGGSTTFSSSAGLLNSSTGKRNKK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaaggatttggtacaagcaacacaggctcaggaggtggctttagttttgga
gcttctagttcaacagcagcaacaaaaacaacacaaagttccactggattctcgtttggt
gctccagccactgcgtctacagggctgggctttggtgccaaacctactgtatctgcacca
agcttaggagcaaaccagtctaaaccagctgcaactggattctcacttggtgggtctgca
actactaaaccaactttgggttttggacaaactgcctctactgcaagcactgcatcagct
ttaacccttggttccacccaaccacaaactaccaaaccagcatttaaggggctgggaggt
gttgatttaacttctactgcatcaacaagtaatggaaatgggaataaaaacaacgggata
agccaggcggtcaaggatcaaggggtacccgaggaaatatgcaaagatgtgaaggctttt
gagagttacgttcaaaagcaaaaaagcgagagcaatgaagtaggaaagttttctgtgcga
tctttgcagaaaatcaacgaagaaatcaacagtttatcagttgctgttggtacaatttct
tctgctgtgcaaaggaataaggcagccgttgaatcgatacgaaatgaattcacaaaccag
ttaaaaaatatggagatcgcccatcgaacacaagatacacctgctgcattacaacatgaa
aatattgctcctatcaagtatttcattgaccttgtatcagagtttagtatcagcatgcag
tcatacagacaccagatggaagaattagaaaaccatttacattcgcttgctcaaccctct
ggcatgaacccacaagacttatctatggctttgtgtaaaatgcaggaaagttttataact
ttggcttcaaatctacattcaatacatgacagtgtgaagcacatcaaagagcaatacctg
gcttatagaaaagttgttcatggcgatcatacagatatatttaagcaaaatattccagtt
ccagcgaagagcaagaaaattgaagggccgtcagctttcagcaacttgagtaatgttgca
gcactcgcaatggcttcaatgttacaacagccacaacaacaacaacaacaggctccccca
caacaaggatttttgggacaaaccaaaactactaacacattatttggtggcaatgcttca
ggcagtttatttggttcaacaaaacctacagttacaactggcagcttatttggctccaaa
cctacgttaagcacgactggttttggaggttttggttccactaatactttgaaaccagct
ctcagtgcaggtttagccacctcaacaagtggaaatatgttttttggaggcagcaccaca
tttagctcaagtgctggcttgcttaactcatcaactggcaagcgtaataaaaaatga
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