KEGG   Ciona intestinalis (yellow sea squirt): 100183070
Entry
100183070         CDS       T01056                                 
Name
(RefSeq) putative helicase MOV-10 isoform X1
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100183070
   03036 Chromosome and associated proteins [BR:cin03036]
    100183070
Enzymes [BR:cin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     100183070
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100183070
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     100183070
SSDB
Motif
Pfam: AAA_12 AAA_11 MOV-10_beta-barrel AAA_30 Mov-10_helical AAA_19 ResIII UvrD-helicase MOV-10_Ig-like Helicase_RecD AAA_22 ATPase_2 DEAD AAA T2SSE PhoH AAA_7 AAA_16 Methyltransf_11 IstB_IS21
Other DBs
NCBI-GeneID: 100183070
NCBI-ProteinID: XP_009857592
LinkDB
Position
2:2222261..2230861
AA seq 1009 aa
MSRSATAECFVMFLTQHPIDKEWHSRAEVEEKFYIFKAENKVKKTSFSSFYQYLIDAKFV
TVKRSASGDFIRVLYHQQSKKNEESKAKAKKNETEKRRFVQYINNRNNRKKMIKGPDDID
VICSNQGFTESNADDGTYSCTLFEGETSRNYQMIVRNKGNFSVVLKKCFLLSDRTVISLS
DTIGCCNLKADIEVQIPKDGEYPIEVTCSSAEEILRFSADAIFTFERIDIKRSKFSMLRH
LTCSRQNNLMEELAPQSKFEKPRRGFGVKDLISFTYEGTRPTLAGNKLEKTLKLGEYKVP
EKIRSALKRKVLLRKEDNVTNEQRGQNGDNNSDESMRQTLHSKLTPENYRRKFSLLLYLE
EIQQTVDRKIYNMTNVFITKTKGGNNFRLKVKNKVVPGLLERRPSVVVGDSILVKMLGPN
EKFCDLDGNGQPVSYQGYVHQVEQEEIVLGFHKKFEQKFVTGMPFAVEFQYNRYPMKLQH
RAVEQLLNAEQLNFLFPNYLKSQFHPLKCPNNLRLYNQKLESNKQQVQAINSIVFDQSQV
PYIIFGPPGTGKTVTIVEAIKQVISHYIECHVLVCAPSNSAADLLTERLREHVDVRKLFR
MCAQSRPLVEGPDFTKVIPDSIKDVCNYNQANHEFFFPSKKELMEYSVLCTTLTTAGRIA
SADFPNNHFDFVFVDEAGYASEPELLISIAGVLKQGGRLIMAGDPKQLGPVIFSHHAKVL
GLSQSLLQRLHDSFEIYGKGEENSYDPRFITKLVNNYRNHPDILDEPNHQFYDGELKACA
DELERNCLCGWSELPQKNFPIIFRAENGVEEREERSPSYFNRKEAVAVYNYVENLLQARG
NGVTPNHIGIISPYRKQCKKIQQLLRKIKGYEKIKIGSVEEFQGQERRVMLISTVRSETD
HLVEDLKQQLGFLANPKRMNVAITRAKALLIVVGNPEVLSYDPTWKSFIDYCWSHGGHTG
FHFDPSAERKYDPISDIIDKLEAFGFNYDDGEDDVSAIMSYVEPRIRHE
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtctcgttctgcaacagctgaatgttttgtgatgttcctcactcaacacccgatagat
aaagaatggcattcccgagctgaagtcgaagaaaagttttacattttcaaagcagaaaat
aaagtaaaaaagacatctttttcttctttttaccaataccttatcgacgcgaagtttgtg
acagtaaagcgctctgcatcgggggatttcatcagagttttgtatcatcagcaatcaaag
aaaaatgaagagagtaaagcgaaggccaagaaaaatgaaacagagaaacgccgctttgtt
caatacattaacaacagaaacaacagaaaaaagatgattaaaggtccagatgacattgat
gttatatgttccaaccaaggttttactgagagcaatgctgatgatggcacttattcatgc
acactctttgaaggtgaaacaagccgtaattatcaaatgattgttcgcaacaaaggaaac
ttcagtgttgtgttgaaaaaatgttttcttctgtctgatcgaactgtgattagtctttct
gatacaatcggttgctgcaacttaaaagctgatattgaagtacaaattccaaaagatggg
gaatatccaattgaagttacatgtagcagcgctgaggaaatcttgaggttttcagctgat
gcaatattcacgtttgaaaggattgatataaaaagatcgaaattttcaatgcttcggcac
ctcacatgttcaaggcaaaataatcttatggaagagcttgctcctcaatcaaagtttgaa
aagccacgtagagggttcggggttaaagatctaataagttttacatacgaaggcacccga
cctactcttgctgggaacaagttggaaaagacactgaaattgggcgagtataaggttccg
gagaaaataagatctgctttgaaaagaaaggtgttattaagaaaagaagataatgttacc
aacgaacaacgtggtcaaaatggggacaataattctgacgagagcatgagacaaactttg
cactccaagttgacccctgaaaactatcggagaaaattttcattactgttgtacttggag
gaaatacagcaaacggtggacaggaaaatttataatatgaccaatgtttttatcaccaaa
accaaagggggaaacaactttaggcttaaggtgaaaaataaagttgtacctggtttactg
gagcgtcgaccatctgtagtagttggtgattcaattctcgttaaaatgctgggaccaaat
gagaagttttgcgacttagatggaaatggtcaacctgtctcttatcaaggttacgtgcac
caagttgaacaagaagaaattgtgcttggctttcataaaaagtttgaacaaaagtttgtc
accggaatgccgtttgctgttgagtttcaatacaaccgttatccaatgaagcttcaacac
agagctgttgaacagttgttgaatgcagagcagctcaattttctgttcccaaattatctc
aaatcccagtttcatccattgaaatgcccaaataatcttagactgtacaatcagaagttg
gaaagcaataaacagcaggtacaagcaatcaattctattgtatttgatcaatcacaagtt
ccatatattatatttggacctccaggaacagggaaaacagttacaattgttgaggcaatt
aaacaagtcatttcccattacattgaatgccatgtacttgtgtgtgctccttccaacagt
gcagctgatttgttgacagaaagactacgagagcatgttgatgttagaaagttgtttagg
atgtgtgcgcagtcaagaccattggtggaaggtccagactttaccaaagttatacctgat
tctatcaaggacgtatgcaactacaaccaagctaaccatgagttctttttcccatctaaa
aaagaactcatggaatacagtgtgttgtgcacaactcttacaactgcaggaaggatagca
agcgcagattttccgaacaatcactttgattttgtgtttgttgatgaagcaggttatgcc
tcagaacctgaacttctaatttctatcgctggtgtcttgaaacaaggaggaaggcttatt
atggcaggagaccccaagcaacttgggcctgttattttttctcaccatgcgaaagtactt
ggtctttctcaatcactcttgcaacgtttacatgactcctttgagatttatgggaaaggt
gaagaaaattcctatgaccccaggtttataaccaagttggtaaataactacagaaaccac
ccagatatccttgatgagccgaatcatcagttttatgatggtgagttgaaagcatgtgcg
gacgagttggagcgtaactgcctctgtggatggagtgagcttcctcagaaaaactttccg
atcattttccgtgccgagaatggggtagaggaacgtgaagaaaggagtccatcttatttt
aaccgaaaggaagctgtagctgtttacaattacgttgagaacctgctgcaagcgagaggt
aatggagtaacacccaatcatattggaatcatttccccctacagaaaacagtgcaagaaa
atccagcagcttctacgaaagatcaaaggatatgaaaagatcaaaattggtagtgtggag
gagtttcaaggtcaagaaagaagagtcatgcttatcagcacagtgcgaagtgaaactgat
catttggttgaggatctcaaacagcaacttgggtttctggctaatccaaagagaatgaac
gttgcaatcactcgagctaaagctcttcttattgtggttggcaaccctgaagttctgtct
tatgatccaacttggaaaagctttattgattattgttggagtcatggaggccatactgga
ttccattttgacccatctgcggaacgtaaatacgatccgatctccgacattattgataaa
ctggaagcgttcggatttaactacgatgacggagaagatgacgtcagtgcaattatgtcg
tacgtagaaccgagaattcgccacgagtaa

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