Ciona intestinalis (yellow sea squirt): 100183070
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Entry
100183070 CDS
T01056
Name
(RefSeq) putative helicase MOV-10 isoform X1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100183070
03036 Chromosome and associated proteins [BR:
cin03036
]
100183070
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
100183070
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100183070
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
100183070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
Mov-10_helical
AAA_19
ResIII
UvrD-helicase
MOV-10_Ig-like
Helicase_RecD
AAA_22
ATPase_2
DEAD
AAA
T2SSE
PhoH
AAA_7
AAA_16
Methyltransf_11
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
100183070
NCBI-ProteinID:
XP_009857592
LinkDB
All DBs
Position
2:2222261..2230861
Genome browser
AA seq
1009 aa
AA seq
DB search
MSRSATAECFVMFLTQHPIDKEWHSRAEVEEKFYIFKAENKVKKTSFSSFYQYLIDAKFV
TVKRSASGDFIRVLYHQQSKKNEESKAKAKKNETEKRRFVQYINNRNNRKKMIKGPDDID
VICSNQGFTESNADDGTYSCTLFEGETSRNYQMIVRNKGNFSVVLKKCFLLSDRTVISLS
DTIGCCNLKADIEVQIPKDGEYPIEVTCSSAEEILRFSADAIFTFERIDIKRSKFSMLRH
LTCSRQNNLMEELAPQSKFEKPRRGFGVKDLISFTYEGTRPTLAGNKLEKTLKLGEYKVP
EKIRSALKRKVLLRKEDNVTNEQRGQNGDNNSDESMRQTLHSKLTPENYRRKFSLLLYLE
EIQQTVDRKIYNMTNVFITKTKGGNNFRLKVKNKVVPGLLERRPSVVVGDSILVKMLGPN
EKFCDLDGNGQPVSYQGYVHQVEQEEIVLGFHKKFEQKFVTGMPFAVEFQYNRYPMKLQH
RAVEQLLNAEQLNFLFPNYLKSQFHPLKCPNNLRLYNQKLESNKQQVQAINSIVFDQSQV
PYIIFGPPGTGKTVTIVEAIKQVISHYIECHVLVCAPSNSAADLLTERLREHVDVRKLFR
MCAQSRPLVEGPDFTKVIPDSIKDVCNYNQANHEFFFPSKKELMEYSVLCTTLTTAGRIA
SADFPNNHFDFVFVDEAGYASEPELLISIAGVLKQGGRLIMAGDPKQLGPVIFSHHAKVL
GLSQSLLQRLHDSFEIYGKGEENSYDPRFITKLVNNYRNHPDILDEPNHQFYDGELKACA
DELERNCLCGWSELPQKNFPIIFRAENGVEEREERSPSYFNRKEAVAVYNYVENLLQARG
NGVTPNHIGIISPYRKQCKKIQQLLRKIKGYEKIKIGSVEEFQGQERRVMLISTVRSETD
HLVEDLKQQLGFLANPKRMNVAITRAKALLIVVGNPEVLSYDPTWKSFIDYCWSHGGHTG
FHFDPSAERKYDPISDIIDKLEAFGFNYDDGEDDVSAIMSYVEPRIRHE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttctgcaacagctgaatgttttgtgatgttcctcactcaacacccgatagat
aaagaatggcattcccgagctgaagtcgaagaaaagttttacattttcaaagcagaaaat
aaagtaaaaaagacatctttttcttctttttaccaataccttatcgacgcgaagtttgtg
acagtaaagcgctctgcatcgggggatttcatcagagttttgtatcatcagcaatcaaag
aaaaatgaagagagtaaagcgaaggccaagaaaaatgaaacagagaaacgccgctttgtt
caatacattaacaacagaaacaacagaaaaaagatgattaaaggtccagatgacattgat
gttatatgttccaaccaaggttttactgagagcaatgctgatgatggcacttattcatgc
acactctttgaaggtgaaacaagccgtaattatcaaatgattgttcgcaacaaaggaaac
ttcagtgttgtgttgaaaaaatgttttcttctgtctgatcgaactgtgattagtctttct
gatacaatcggttgctgcaacttaaaagctgatattgaagtacaaattccaaaagatggg
gaatatccaattgaagttacatgtagcagcgctgaggaaatcttgaggttttcagctgat
gcaatattcacgtttgaaaggattgatataaaaagatcgaaattttcaatgcttcggcac
ctcacatgttcaaggcaaaataatcttatggaagagcttgctcctcaatcaaagtttgaa
aagccacgtagagggttcggggttaaagatctaataagttttacatacgaaggcacccga
cctactcttgctgggaacaagttggaaaagacactgaaattgggcgagtataaggttccg
gagaaaataagatctgctttgaaaagaaaggtgttattaagaaaagaagataatgttacc
aacgaacaacgtggtcaaaatggggacaataattctgacgagagcatgagacaaactttg
cactccaagttgacccctgaaaactatcggagaaaattttcattactgttgtacttggag
gaaatacagcaaacggtggacaggaaaatttataatatgaccaatgtttttatcaccaaa
accaaagggggaaacaactttaggcttaaggtgaaaaataaagttgtacctggtttactg
gagcgtcgaccatctgtagtagttggtgattcaattctcgttaaaatgctgggaccaaat
gagaagttttgcgacttagatggaaatggtcaacctgtctcttatcaaggttacgtgcac
caagttgaacaagaagaaattgtgcttggctttcataaaaagtttgaacaaaagtttgtc
accggaatgccgtttgctgttgagtttcaatacaaccgttatccaatgaagcttcaacac
agagctgttgaacagttgttgaatgcagagcagctcaattttctgttcccaaattatctc
aaatcccagtttcatccattgaaatgcccaaataatcttagactgtacaatcagaagttg
gaaagcaataaacagcaggtacaagcaatcaattctattgtatttgatcaatcacaagtt
ccatatattatatttggacctccaggaacagggaaaacagttacaattgttgaggcaatt
aaacaagtcatttcccattacattgaatgccatgtacttgtgtgtgctccttccaacagt
gcagctgatttgttgacagaaagactacgagagcatgttgatgttagaaagttgtttagg
atgtgtgcgcagtcaagaccattggtggaaggtccagactttaccaaagttatacctgat
tctatcaaggacgtatgcaactacaaccaagctaaccatgagttctttttcccatctaaa
aaagaactcatggaatacagtgtgttgtgcacaactcttacaactgcaggaaggatagca
agcgcagattttccgaacaatcactttgattttgtgtttgttgatgaagcaggttatgcc
tcagaacctgaacttctaatttctatcgctggtgtcttgaaacaaggaggaaggcttatt
atggcaggagaccccaagcaacttgggcctgttattttttctcaccatgcgaaagtactt
ggtctttctcaatcactcttgcaacgtttacatgactcctttgagatttatgggaaaggt
gaagaaaattcctatgaccccaggtttataaccaagttggtaaataactacagaaaccac
ccagatatccttgatgagccgaatcatcagttttatgatggtgagttgaaagcatgtgcg
gacgagttggagcgtaactgcctctgtggatggagtgagcttcctcagaaaaactttccg
atcattttccgtgccgagaatggggtagaggaacgtgaagaaaggagtccatcttatttt
aaccgaaaggaagctgtagctgtttacaattacgttgagaacctgctgcaagcgagaggt
aatggagtaacacccaatcatattggaatcatttccccctacagaaaacagtgcaagaaa
atccagcagcttctacgaaagatcaaaggatatgaaaagatcaaaattggtagtgtggag
gagtttcaaggtcaagaaagaagagtcatgcttatcagcacagtgcgaagtgaaactgat
catttggttgaggatctcaaacagcaacttgggtttctggctaatccaaagagaatgaac
gttgcaatcactcgagctaaagctcttcttattgtggttggcaaccctgaagttctgtct
tatgatccaacttggaaaagctttattgattattgttggagtcatggaggccatactgga
ttccattttgacccatctgcggaacgtaaatacgatccgatctccgacattattgataaa
ctggaagcgttcggatttaactacgatgacggagaagatgacgtcagtgcaattatgtcg
tacgtagaaccgagaattcgccacgagtaa
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