Ciona intestinalis (yellow sea squirt): 100183076
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Entry
100183076 CDS
T01056
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100183076
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
100183076
Prokaryotic type
Methyltransferases
100183076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Dynamin_N
SRPRB
DO-GTPase2
Ras
MMR_HSR1_Xtn
Med21
Roc
Glyco_hydro_3_C
MCM
AAA_24
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100183076
NCBI-ProteinID:
XP_002128736
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All DBs
Position
2:2841598..2843626
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AA seq
544 aa
AA seq
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MFSCLFAKMLGRKKLWGFCLRNVSTISSNLLSCTLSRITVQITTLVTSSRTLASVQTKWQ
ILYNHCKCYSTESLLHQSTIYAVSSGFGKCGVSIIRVSGKCSPNALLKLTKRKSLPGPRK
AIVQPIYHPVSNLMLDRSLVLWFPRPSSFTGEDVCEFQVHGGPAVIASVLNALSCITGLR
PAEAGDYTKQAFLNGKLDLTEVEGLGDLIHAETEAQRRQALHQMEGSLASLYKGWSNEVL
RCVAHLEAFIDFEEDEDLDPDIICNIRLNTTKMISKIQHHLSDERRGERLRDGVRVAIIG
KPNVGKSSLLNAVTQRPAAIVSPIPGTTRDVIETALDISGFPVLISDTAGLRRSHGVIEK
QGVDRAYVKAKEADLVVLVVNSQEVNNKDLNNFSEFIKQHAHELHLEKTSLENLIVILNK
SDLLESEKLKKIRDLQSEYASVLLISCKTLDGFQDLLQTFSKRLEKLCGGSCVGETPSVT
QQRHRLHLNNCVSFLEKGNQFLNKDVVIAAEYFRMALTELGRISGKIGSEDILDVIFKDF
CIGK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatgtttatttgctaaaatgttaggcaggaaaaaattgtggggattttgttta
aggaatgtttcaaccatttcttccaatttgttatcttgtactttgtcccgtataacagtg
caaattaccacactggtaacaagttcacgaacacttgcatcggtacaaacaaaatggcag
atcttgtataatcactgcaagtgctattctactgaaagtttgctacaccaaagcacaata
tatgctgtttcttctgggtttggaaaatgtggggtttccattatccgagtttctggcaag
tgctccccaaatgcgctgctaaaactaaccaaaagaaaaagtttacctggacctaggaaa
gctatcgtgcaaccaatatatcatccagtctcgaatttaatgttagaccgctcactggtt
ttgtggtttccacgcccaagcagtttcacaggggaagatgtttgtgaatttcaggtccat
ggtgggccagcagtaattgcatcggttcttaatgcactttcatgcattacgggcctaagg
cctgcggaagcaggtgactacacaaagcaagcgtttttaaatgggaagttggatcttaca
gaggtggaggggttaggtgacctgatacatgcagaaaccgaagcccagcgtcgacaagcg
cttcaccaaatggaagggtccttggcatcgttgtataagggctggagtaatgaagttctg
aggtgcgttgctcacttagaagcatttattgactttgaagaagatgaagacctggatcca
gatatcatttgcaatatcaggttaaacacaacaaaaatgatctctaaaatacaacatcat
ttatcagatgaacgtcgcggagagagactgagagatggggtaagagtggccatcattggt
aagccgaatgtggggaagagcagtttactgaatgctgtcacccaacgtccagctgccatc
gtgtctcctatacctggtaccacaagggatgttattgaaactgctctggatatttcaggc
ttcccagttttgataagtgatactgctggtttgagaagaagtcatggtgttatagaaaaa
caaggtgtcgatcgggcatatgttaaagccaaagaagcagacttagttgtcttggtggtt
aattcccaagaggtaaataataaagatttaaataacttctcagaatttatcaaacaacat
gcccatgaattgcaccttgaaaagacttcattggaaaacttaattgtgattttaaataaa
tcggacttgttagaaagtgaaaaacttaagaaaattcgtgatttacaatcagagtacgct
agtgtgttgttaatttcttgcaaaacattggatggatttcaagaccttctacaaactttt
tccaaaagactcgaaaagctgtgtggtggttcttgtgttggtgaaactcctagtgttact
caacaaaggcacaggctccatctaaataactgtgtttcattccttgaaaaaggaaaccaa
tttttgaataaggatgttgttatagctgctgaatattttcgaatggctttaactgaactg
ggtcgtatttcaggcaaaataggatctgaggatattttagatgtaatttttaaagatttt
tgtattgggaaataa
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