KEGG   Ciona intestinalis (yellow sea squirt): 100183088
Entry
100183088         CDS       T01056                                 
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 4-like isoform X1
  KO
K15426  serine/threonine-protein phosphatase 4 regulatory subunit 4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cin01009]
    100183088
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cin03400]
    100183088
Protein phosphatases and associated proteins [BR:cin01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     100183088
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     100183088
SSDB
Motif
Pfam: HEAT HEAT_ECM29 Vac14_Fab1_bd PPP2R1A-like_HEAT HEAT_2 PDS5 HEAT_EF3_N Transcrip_reg
Other DBs
NCBI-GeneID: 100183088
NCBI-ProteinID: XP_009859791
LinkDB
Position
9:4090895..4103220
AA seq 972 aa
MMDLSSDMASLEDDIQEFNIEKDVRTSLKSQEELDKLTVDETLSDVDRAVYLLSSGQEVQ
FLSVIHNLPSLLKGWQNESIRRVLPKVKEMLHTAGLDVQLAATEVFTTVAKEELLPIAVY
TQHFLRAIITNMNTKEPASSQAWLDTLLSVIPFLPKETVRREVLGLAIAKGQLSQPTASR
LSCCSILGAVAVKFDAHIVKKDIVHTVKQLCQDVEHNVRACMCSYLHSVAAALGAEETRK
CILDEVVELAGDEESQVREAAMEALLNMTDLLDDDCLVQHVVPLVCKYCEQALQNEDHTM
LSVAKNFGRFCHNISKNFNAEQHAWLLSIYRKLCTVGRTPLDLNDGSQDPIMLHITPPTP
DVTPTPSHQPNPDKMEEYLGCRRLSAYNFPAVVVFCLTESFEHELLECASLLCTDADPQV
RKHFASGLHEVAQSLEALAYLVQPHLVLLLRERHVPGVLDACLRRLPDTLTAVIIRGNLA
DNKVNGVTELIGALLAALSRLEQQWPSVWRPLETLVTHLRRLPDVITSDQIYYKFAPIIF
KLLTTNHYLPVRQAAASTVCVFIRHNRKMEQRREMWDRLIQDLCYSRNYRNRNLFFDACR
HMMALFSRSFFKEHLFEHVLGLFNDPVPNVRLCLCKILPSMKALLKLPKDRSLHGQLETN
VRKLLSSEKDRDVSIAIRTTILELDRTEVAMESLTAQHHVDVDLQDQRKEEEELMLLQQE
MKNKDEDARSLRSHGSSHSSSSVGKAMANRSDKKKKRNNSVQSSTQSSLLKVNGKDKEKS
RSLHQLDSRSNPGYPQQREGILANATGSGISSVLYNLGTSTSPRSLPNHFATHSSYLTGA
NNPANQGPSTALGHKGPPFHGQPMGQTRSSPLSASAGFIGSIPTAQSNQSTSSTHQTNKT
TRKSDRRKASALSHQNTASQDEPRTRKDSTGSASSTGSGSRKGHQALRRKGSLPGSPIGA
SSNRTRKEKNAR
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgatggacctcagcagtgatatggcctccttggaagatgacatacaagagtttaacatt
gaaaaggatgttagaaccagtcttaagagccaagaagaactggataaactcacagtggat
gaaacattaagtgatgtagaccgcgctgtgtatttactcagttcagggcaagaagtgcaa
ttccttagcgtgattcacaatcttccatccctactcaagggctggcaaaacgaaagcatt
aggagggtgctaccgaaggtcaaagagatgttacacacagcaggcctagatgttcaactg
gcggcgacagaggtctttaccactgtggccaaagaagagctattaccaattgctgtgtac
actcagcattttcttagagccatcataacaaacatgaacaccaaagaaccggcctcgtca
caagcctggctcgacactcttctctccgtcatcccattcctcccaaaagaaaccgtccga
cgagaggttcttggactcgccatagcaaaaggccaactttcccagcccactgcatcacgt
ttgtcttgctgttccatccttggggctgtggctgtaaagtttgatgctcacatagttaaa
aaagacatcgtgcatactgtcaagcagctgtgtcaggacgttgagcacaatgttcgtgca
tgcatgtgttcctatctgcacagtgtggctgcagcattaggagctgaggagacacgcaaa
tgcatccttgatgaagttgtggagcttgctggtgatgaggagagccaagtccgggaggcg
gcgatggaggctcttctaaacatgacagatcttcttgatgatgattgcttagtacagcat
gtggtacccttggtatgcaagtattgtgaacaagctttgcagaatgaagatcataccatg
cttagtgtggcgaaaaattttggccgattttgccacaatatttcaaaaaatttcaacgct
gaacaacatgcatggcttttatcaatataccgaaagctttgtacggttggacgtacaccc
cttgaccttaacgatgggagtcaggaccccatcatgctccatataaccccacccaccccc
gacgttaccccaacaccttcccaccaacccaaccctgataaaatggaggaatacttagga
tgcaggaggcttagcgcatacaattttccggctgttgttgtgttttgcttgacggaatcg
tttgaacacgagttacttgaatgcgcgtctctactttgcaccgatgctgacccacaagta
cggaaacattttgcttcaggtttacacgaagttgctcaaagtttagaagcgcttgcgtat
ctcgtccaaccccacctagtgttgcttctacgtgagcgtcacgtgcctggcgtgcttgac
gcttgtttgcggcgactccctgatacacttacagctgtcattatacgtgggaaccttgct
gataataaggttaacggagttactgagttgataggagcgctccttgctgccctctcgagg
ctcgaacaacaatggccgagcgtttggcgacctctagaaacccttgtcacgcatctgcgg
cgcctgccagatgttataacctcagatcagatatattacaaatttgctcccatcatattc
aagctgctcacgaccaaccattatcttcctgtgagacaagcagcagcatctaccgtttgt
gtttttattcgacacaacaggaaaatggagcaacgaagggagatgtgggaccgcttaata
caagatctttgctactctcgaaattatcggaaccgaaatttgttctttgatgcatgtcgt
cacatgatggctctattttcccgctcgtttttcaaggagcatctgttcgaacatgtgctt
ggtttattcaatgatcctgtacctaatgtgcgcttgtgtctgtgcaagatactacccagt
atgaaggcgttgctcaagcttccaaaagatagatccctccatggtcagttggaaaccaac
gtaagaaaacttctgtcatctgagaaagatagagatgtgtccatcgcaattcgaacaact
atattggagcttgatcgtacagaagtagcgatggaatcgttaactgctcagcatcatgtg
gatgttgacctccaggatcagagaaaagaagaggaggaactgatgctcctccaacaagag
atgaagaacaaagacgaagatgccaggtcgttacgcagccatggtagcagtcactcttca
tcatcagtaggtaaagcaatggccaaccgttcagataaaaagaagaaacgaaataattcg
gttcagtctagcacccaatcatccttgcttaaagtgaatggcaaagacaaagagaaatca
agatcactccatcaactcgattcaaggtcaaatccaggttacccccaacaaagagaagga
atattggccaacgctactggtagcggcatctcatcagtgttatataaccttggaacctcc
acttcacctcggtcccttcccaaccactttgccacgcatagctcttacctaacgggggcc
aacaaccccgcaaaccagggaccttcgacggccctcggacacaagggccccccctttcat
ggccagccaatgggccaaacacggtcctcccctttatccgcaagtgccggatttatcgga
tctatcccaactgcacaatctaatcaatcaacgtcttcaacacatcaaactaataaaacc
accagaaaatccgaccgtcgcaaagcatcagctctctcccaccaaaacactgcaagtcaa
gacgaaccacgcacacgtaaagacagcaccggaagtgcgtcatcaaccggaagtggaagt
aggaaaggccatcaagcgttgcgtaggaaaggctctctacccggtagtcctataggagca
tcatcaaatcgaactcgtaaagagaaaaacgcgagataa

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