Ciona intestinalis (yellow sea squirt): 100183106
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Entry
100183106 CDS
T01056
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00330
Arginine and proline metabolism
cin00480
Glutathione metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Module
cin_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
100183106
09106 Metabolism of other amino acids
00480 Glutathione metabolism
100183106
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100183106
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
100183106
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Motif
Pfam:
Orn_Arg_deC_N
Motif
Other DBs
NCBI-GeneID:
100183106
NCBI-ProteinID:
XP_026693428
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Position
14:1642621..1645105
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AA seq
316 aa
AA seq
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MPAADLVSLEPSKPLKPPVYGVRKGKSRKEFAKVFVNSQRNLKEWDSSFYLGDLGQVVRN
LQMWTKHMPKIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIETALKCGVKPEDILFA
VPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHPTGKLLLRLNVCEFEEGVRMGDKFG
ASMSDAKKLVLLCKSLNLNLNGICYHPGSGVESFECIMSCLQQCKELYDFAASNGVDLKT
IDIGGGFLCGENFIKISKQVAATIDRLFPPETGLTVIAEPGRFMNEIAEKLDPKSPLFEQ
YQRLEKTDEEIISNDV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgccgacctagtatcactagagcctagcaagccgttaaaacctcccgtctat
ggagttagaaagggtaaaagtcgaaaggaatttgcaaaggtttttgtaaattcacagcgg
aatttaaaggaatgggattcctcgttttaccttggagatcttgggcaagttgtacgaaac
ttacagatgtggacgaagcacatgcctaaaatcagaccgtactacgccatgaagtgcaat
ccctcacaaccagtggtacaactgctagcgtcgttgggcgtgggcttcgactgtgccagt
aagtttgaaattgaaacggctctaaaatgcggagtgaaaccggaagacattctctttgct
gtaccatgcaagatgtcttcccatattgaatacgcttgtcaaaccggtgttcaagttatg
actgttgacaacgctgacgaactgcacaaaatcaaacggattcatcctaccggaaagttg
ctgttacgtttgaatgtctgtgagtttgaagaaggggttagaatgggggacaaattcggc
gcatcaatgtcagatgccaaaaagctcgtattattgtgcaaatcgctcaacttaaatttg
aatgggatatgttaccatcctggaagtggggttgaatctttcgaatgtataatgagctgc
ttgcagcagtgtaaagaactctacgactttgctgcttctaatggggtagatttaaaaact
attgacattggcgggggattcctttgtggcgaaaactttatcaagataagtaagcaagtt
gctgctactattgaccggttgtttccgcctgaaaccggtttgacagtcattgctgaacct
ggtagattcatgaatgaaatcgctgaaaaattagaccccaaatcacccttgtttgagcag
tatcaacgactggagaaaaccgacgaagaaataatttccaatgatgtgtag
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