Ciona intestinalis (yellow sea squirt): 100183138
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Entry
100183138 CDS
T01056
Name
(RefSeq) trafficking protein particle complex subunit 12-like
KO
K20309
trafficking protein particle complex subunit 12
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100183138
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100183138
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_14
TPR_12
ANAPC3
TPR_11
TPR_17
Motif
Other DBs
NCBI-GeneID:
100183138
NCBI-ProteinID:
XP_002122321
LinkDB
All DBs
Position
7:4552535..4558915
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AA seq
736 aa
AA seq
DB search
MAEQTDIPVCTLFQETAADLNVNAGDFLQDCKPIDDSTEKSKISKEEKQSPGVCNLFQDD
ASDVDLFSSLAITDQSFVAEPSARSDATEASVENMDQNEKNSGIEDKHTVMDANNCEESP
EQNDTMASILINDSFENISNISFDQSHTEPEVETNLITTTDQISQSSLENDVKTEASNTA
VVGQDQNNLITTTDQIQPTFLENDEKTEASNTAVMKQDENKNMDFENKEKPEVSTVQAVS
TNEKPAEPARIESTEQTTSDVNTTLASALFSNLDYSSPFDRIRKPSEDAFTSALTNSEAD
RRRDAWIPSDSTSAVLSAIFTSQKRIKLEPTHLTRPGLATSESLGDPIKAVLARHGATDI
ANQRQRNTADSVSQDKGGLMELVTSGDLRAAVDLCGKILTDLGQGFGHATQPSENSPVSL
QWWHARLSLLIRLKLYELAETEINQFGDFDKADLYFGFYPDLYPGRRGSMVPFSMRVLHA
QFPLHNNKPDEALGRLYALQDTCEKILHHLNCGKKEDGLVGELKCEDKEASIRLWKERSK
SLFYCIGNALLQNREYEAAIKTYDHILTTNGGDAVYLQSGIGRALLQLGSIKSAQHRFTK
AEQAANDDPKYKPQLLMNRAFLYLGASNWKEALVQFNEVLKLDPQNLEALNNKSVCLLYL
CRLRDAITSLETAVWMQSKENAKDFVKNQLPFEGALSNLVTLYELESSRFMSKKQSLLHH
IANISGDGFDVTCLKM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaacagacattcccgtatgcacgctgtttcaagaaactgcagccgattta
aatgtaaatgctggagatttcttgcaggattgcaaaccgattgacgattctacagaaaag
tccaaaatttcaaaagaagagaaacaaagtccaggtgtttgtaatttatttcaagatgat
gcgtcagacgtagatctattctcaagtttggcgatcacagatcaaagttttgtggcagaa
ccttctgcaagaagtgatgcaacagaggctagtgttgaaaatatggatcaaaatgagaag
aactctggtatagaggataaacatacagttatggatgcaaataattgtgaagaaagtcca
gagcaaaatgataccatggcttcaatattgattaacgactcatttgaaaatatttctaat
atttcgtttgaccaatctcatacagaaccagaggtagaaactaacttgatcacaacaaca
gaccaaatttctcaaagttcccttgaaaatgatgtgaaaactgaagccagcaacaccgcc
gtggtaggacaagatcaaaataacttaataacaacaacggaccaaattcaaccaactttc
ctcgaaaatgatgagaaaaccgaagccagcaacaccgctgttatgaaacaagacgaaaac
aaaaatatggattttgaaaacaaagaaaaaccagaagtatcaactgtacaagctgttagt
accaatgaaaaaccagcagaacctgccaggattgaatctacagaacaaacaacttctgat
gtaaacaccacactcgcaagtgctttgttttcaaacttagattactcaagtccatttgat
cgcatcagaaaaccatcggaagatgcattcacaagtgcgttgaccaacagtgaagcggat
cgtagacgagatgcatggattccatcggactccacatcagcggtcctctctgccatcttt
acatcacagaagcggatcaaactggaaccaactcacttgacaagaccgggactcgcaacc
agtgaatctttaggtgatccaatcaaagcagttttagctcggcatggagcaacagacatc
gcaaaccagaggcaacgtaacacagcagattctgtgtcacaagataaaggagggttaatg
gagttggtgacaagtggtgatctacgagcagctgttgatttgtgtggaaagattctcacg
gatcttggccaaggatttggacatgcaacccaaccaagtgaaaattcaccagtttcttta
cagtggtggcatgcaaggcttagcttattaataagattaaagttatacgagttggctgaa
actgaaatcaaccagttcggagattttgacaaagctgatctttattttggtttctaccct
gatttatatccaggtagaagaggtagtatggttcccttctccatgcgtgtactgcatgca
cagtttcctctgcataataataaaccagatgaagcactcggacgattgtatgcattacaa
gatacttgtgaaaagatcctgcatcaccttaactgtggaaagaaagaagatggactagtt
ggtgaattgaaatgtgaagataaagaagcttctattaggttgtggaaggaaagaagcaag
agtctgttctactgcataggcaatgcattattacaaaacagagagtatgaagcagctatt
aaaacttatgatcacatccttactacaaatggaggtgatgccgtttaccttcaaagtggt
ataggccgtgccttgcttcaacttggtagcatcaaatctgcgcaacacaggttcacaaaa
gcagaacaagcagcgaatgatgatccaaagtataaaccccaactcctaatgaacagagct
tttctgtaccttggtgcaagcaattggaaagaagctctcgttcaatttaatgaagtgcta
aaattggaccctcaaaatcttgaggctcttaacaacaagtccgtgtgtttgttgtattta
tgtcgattgagagatgcgattacttcgctcgaaactgctgtgtggatgcagagtaaagag
aatgcaaaagattttgttaaaaatcaattaccgtttgaaggagcgctttccaaccttgtt
actctatatgagttagaatcatcacgttttatgtcaaagaaacaatcgttattacaccat
atcgccaatatttctggtgatgggtttgacgtgacatgtctcaaaatgtga
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