Ciona intestinalis (yellow sea squirt): 100183194
Help
Entry
100183194 CDS
T01056
Name
(RefSeq) synergin gamma-like
KO
K25219
synergin gamma
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100183194
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
100183194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
100183194
NCBI-ProteinID:
XP_002123713
LinkDB
All DBs
Position
2:complement(7488155..7499458)
Genome browser
AA seq
1213 aa
AA seq
DB search
MDPYNSNQQHMSGNTPYMMHNTQYMNANNPMMQMQGFQQMNPAAQFQNVGFNQAGMGYVN
PQQIPPHPHQPVNHFQPRHNFRPPVATATNQVSSEEEKKQRYKLEQQRKFRNFGSNFGRT
TIDSMMNNIVSSTTKQQTPSKKPQQSNNHNEDDFGDFLQANQQQPIIQHQTPSHSTQQTT
SQPVINQVAPIPSASVVDDFADFAPAVAPTPKHASTTTNVASTQPQANHLQSKMLASLDL
NQPKQASQHFRSVKPPPSKRPESKILHVSSKAANWSALEVNEEEFQVVAEQPVVAPFVEP
PHQVEVSPTVQPPTWISNIALAPLLYNQVLEASLGSDGLIDTNKVHPILLRSQLSNETLG
HLWSQANKMVPGRLNQEELFILLALIALTQGGETNPTVDMVRYLPSPPLPTLNVPPAQQY
PSTSMNNEQTTNFGQFNPHGSNTPSEPITEAQTMVYTNPSPADTVHSKSLEDDFDDFQDF
QSVTASVLPSFNTPVENTHTNFVTGNTFQPTIPQSLPQIKLETKAQNVNTTPAHNLNHPA
SILSLTHQPITANETPNIYSAFNEAPTSSFFNLPTSNEMVSPPTTTGVSNLPDFEPPTYS
SLFTRDPDIFSDTSGSLAPPSTFPATNSSPAPPTVESDTNDDFGDFSSAKVEWKSLFTDN
LAAQKNKSSSFSALPQSLKQSSVAAIKSENNLLESIEIAKAEDKYAAFSDSSFSTKFDNV
STKSDQNSVKSLDMNNALSKLKSDSNSVLSLDLKNSTKFGIHTVDSEANSVKSLEFTNIS
DTIMQQSIGSVSPKPLATNTAVKLDLYDDDDDFGDFCEPPPDVPPDTNDEFDEYNGGNSA
LVDFDPFETFPSSSKKKKDEKSNEQVFPLSPSFQKKVEGIQSPLSPPHETFGKPASSFTE
SGNTAAVTVEAPTHQNETLNGANNEKKNEENEVSDQPIETVQSIPATKPDFTPKNINLKD
PDYFLKNSLFTPEIVKKESTEDKDDDQDSSQPYPEDVQDEEVPTADLKPKFDASVWSNGH
VVQEQVVHAVFEDNSETLTVEQSEWQLQTRQVDHVREYTEKWELCLSACLEVILQTNETL
SSIESPAVCNEVLYSCKGQRFISDLSAVYQVARRICSSARKIKLEISQLKQLHKQIELSW
NNLLSFCPNASVNELEVVAKNESTCVCGVCLLAMKGSQINYGGSNYHATCANLWLNHVAS
VLPALQLPQPAQT
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggatccatacaacagcaaccagcaacatatgagtggtaacacgccatacatgatgcac
aacactcagtacatgaatgcaaataatcctatgatgcaaatgcaaggattccaacaaatg
aaccccgctgctcagtttcagaatgttgggtttaaccaagccggcatgggttacgttaac
ccccaacaaataccaccccacccacatcaacctgtcaatcattttcaaccgcgacataat
tttcgacctccagttgccacggcaaccaaccaagtgagttcggaagaagagaaaaagcag
agatacaaacttgagcagcaaaggaagtttcgaaactttggcagcaactttggccgtaca
acgatagactcgatgatgaacaacattgtgagctcaacaacaaaacaacagacaccatct
aaaaaaccacagcagtcaaacaaccataacgaggatgactttggtgacttcttgcaagca
aaccaacaacagccaattatacaacatcaaacaccaagccattcaactcaacaaacaacc
agccagcctgttataaaccaagtcgcaccaatacctagtgcttcagttgttgatgatttt
gctgactttgcaccagctgttgcccctacacccaaacatgctagtacaacaactaatgtt
gcttcaacgcaacctcaagcaaaccacttacaaagcaaaatgcttgcgtcccttgatctg
aaccaaccaaagcaagcttcacagcactttagatcagtgaagccacctccttcaaaaaga
cctgaaagcaaaattcttcacgttagttcgaaagctgcaaactggtcggcattagaagta
aacgaggaggaatttcaagttgttgctgaacagccagtggtcgccccgtttgttgaacca
ccacatcaagtagaggtttcaccaacagttcaacctccaacatggataagcaacatcgca
ctcgcaccactgctgtataaccaggtgttagaagcatcacttggtagcgacggtttgatc
gacacaaacaaagttcatcctattctactgcgttcgcaactaagtaatgaaactctggga
catttatggtcccaagccaacaaaatggtcccaggccgactaaaccaggaagaacttttc
attcttctcgctttaatagcactaacacagggtggagaaactaacccaacagttgacatg
gtaaggtatcttccatcaccccccctcccaacactcaacgtacccccagctcaacaatat
ccatctacaagtatgaacaatgaacaaactacaaattttggtcaatttaacccccatgga
agtaataccccttcagaaccaatcacagaagctcaaactatggtgtatacaaatccctca
ccagcagatactgtccattcaaaatcccttgaagacgactttgacgattttcaagacttc
cagtccgtaacagcatcagtgttgccaagttttaacactcctgttgaaaatactcacacc
aactttgtgactggcaacaccttccaacctactatcccacaatccctacctcaaataaaa
cttgaaacaaaagctcaaaatgtgaacacaacaccagcacacaacttaaaccacccagca
agcatattatcccttacccaccaaccaataactgcaaacgaaacaccgaacatatactca
gccttcaatgaagcaccaacctcatccttcttcaatcttccaaccagcaacgaaatggtt
agccctccaaccaccactggagtttcgaacctccctgattttgagccccccacatactcg
tccttgtttacccgtgatccggatattttttccgacacaagcgggtctttagctccacca
agtacatttcctgccacaaacagctctccggctccacctactgttgaaagcgacactaac
gatgactttggagacttctcttccgcaaaggttgaatggaagtcactgtttacagataat
ttagcagcgcaaaaaaacaaatcttcctctttttctgcactgccacagtctcttaaacaa
agcagtgttgccgcaataaaaagtgagaataatttacttgaaagcatagaaatagcaaaa
gctgaggacaagtacgcagctttttcggactctagcttttccaccaagttcgacaatgta
tcaacaaaatctgaccagaattcggtcaaaagtctcgacatgaacaacgctctctcgaag
cttaagtctgactcgaattcagtcttaagcctcgatttaaaaaacagcacaaagttcggc
atccacactgtagattccgaagcaaactcagttaaaagtttggagtttacaaatatttcg
gacacaattatgcagcagtctataggaagtgtctcacccaagccactggctacaaacact
gctgttaaacttgacttatacgacgatgacgatgactttggtgatttctgtgagcctccc
cctgacgtgcctcctgacacaaatgatgagttcgacgaatacaacggcgggaactcggct
ctggtcgattttgatccatttgaaacttttccatcttcttcaaagaagaaaaaagatgag
aaatcgaatgagcaagtgtttcctctaagtccgtcgtttcagaagaaagtggaaggcatt
caatcacctttatccccaccacatgaaacatttggaaaacctgcttcaagttttactgaa
tctggaaacactgctgctgttacagttgaagcacctacccatcaaaatgaaacattgaat
ggcgcaaacaatgagaagaaaaatgaggaaaacgaagtttcagatcaacctattgaaaca
gtccagtcaattcctgctaccaaaccagactttacacctaaaaatatcaatttaaaggac
ccggactactttcttaaaaactcacttttcactccggaaattgttaaaaaagagtccaca
gaagataaagatgatgatcaagattcttcccaaccgtatccagaagatgttcaagatgag
gaagtcccaactgcggatcttaaaccaaaatttgatgccagtgtttggagcaacgggcat
gtggtacaggaacaagtggttcacgctgtgtttgaagataattcagaaactctcacagtt
gagcaaagtgagtggcaacttcaaacacgacaggttgatcatgtgagggaatacacagag
aagtgggagctgtgtctcagtgcttgtttagaagttattctacaaaccaatgaaactttg
agctcaattgaatcacccgctgtctgtaacgaagtgttgtattcatgcaaagggcaaagg
tttatttcagacttatctgctgtttaccaagttgcgcgcagaatctgcagcagcgcacgc
aaaattaaattggaaatctctcagttgaaacaacttcataaacaaatagaattatcatgg
aacaatctgctgtctttctgtcccaacgcaagtgtaaatgaattggaggttgtagctaaa
aatgaaagcacctgcgtttgtggcgtctgcttacttgccatgaaaggtagtcagataaat
tacggtgggtcgaactaccacgcaacttgcgctaacttatggttgaaccacgttgcctca
gttctccccgcattacaattgccacagcctgctcaaacataa
DBGET
integrated database retrieval system
