KEGG   Ciona intestinalis (yellow sea squirt): 100183232
Entry
100183232         CDS       T01056                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49-like
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100183232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100183232
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     100183232
SSDB
Motif
Pfam: RNA_pol_I_A49 OmpH Gemini_AL1_M PMC2NT
Other DBs
NCBI-GeneID: 100183232
NCBI-ProteinID: XP_002124450
LinkDB
Position
Unknown
AA seq 407 aa
MSEIILKYDNKSSTKTLVEFSNGTPKPDSEFQCSLYADKRLQNPKFKNNKVLVVQGSHLK
YVGDNYEDRHANPTASRYVLMEVDEKKQVGKIFETEYFKLRPIIGSEDIDIDEEREKTEK
QLEQDERSFIERQDDLTEVFGSHRRKRAMVTRLRNKVKDSTDAVQTAVEAIMENADTSLL
LDEEGALDTMIIPCCKTAETVEDVYPLTNIFPDHVSRCLIEEAQKFIHPTGAEITEWKNQ
GEGLGSRFIVEHAKNPALAIVQNSQIHTEYACCLQLMVCLIRLYKVKSSEYRAKTVFTDL
AEPVRDWVLSEFFLDGCNRNRKMPTRMKDKVLAYAIVLAWHMDSFSTDGDMIKEAFSISQ
KKLSTHVRALGGNVNLLSKNGFKRTSVILKLPLQFPNTAFKGRGQGH
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgagtgaaattatactgaaatatgataataaatctagtacaaaaactcttgtagagttc
agcaatggcacacccaaacctgattcagagtttcaatgctctctatatgcggataaacgt
ttgcagaacccaaaattcaaaaacaacaaagtgctcgttgtgcaaggatcacatttaaaa
tatgttggagacaattatgaagataggcatgccaatccaactgcatcaagatatgttctt
atggaagttgacgaaaaaaaacaagtgggtaagatttttgaaactgagtattttaaattg
agacccattattggaagtgaggacatcgatattgatgaagaaagagagaagacagaaaaa
cagctcgagcaagatgaacgtagctttatcgagaggcaagatgacctgactgaagtgttt
ggaagccacagaagaaaacgtgcgatggtaacgagattaaggaacaaagtaaaagacagc
acagatgctgttcaaactgcggttgaagcaatcatggaaaatgcggacacctctttactt
ttagatgaagaaggtgctttggacacaatgataattccatgttgtaaaactgcagagacc
gtagaagatgtttacccgttaacaaatatcttccctgatcatgtaagtcgctgcttgatt
gaggaagctcaaaaatttattcacccaacgggagcagaaattacagaatggaaaaatcaa
ggggaagggttgggatctcgatttattgttgaacatgcgaagaatcctgcacttgcaatc
gtgcaaaactctcaaattcacactgagtatgcttgctgcttacaactcatggtgtgtctc
atcagattgtataaagtaaaatcaagtgaatatcgtgcaaagacagtatttactgatcta
gctgaaccagttcgagactgggtactctctgaattctttttggatggttgtaacagaaat
cgaaaaatgcctacccgaatgaaagataaggtgttggcttatgctattgtgctggcctgg
catatggattcctttagcactgatggggacatgattaaggaggctttttcaatttcacaa
aaaaaattatcaacccatgttcgagcactaggtggaaatgtaaacttgttatctaagaat
ggctttaaacgtacaagtgttatcctgaaattgcctttacagtttccaaatactgctttt
aagggcagaggacaaggccattag

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