Ciona intestinalis (yellow sea squirt): 100183237
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Entry
100183237 CDS
T01056
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100183237
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100183237
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100183237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Ig_ILCR1
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Ig_J
Fn3_Dep-1_4th
Interfer-bind
FN3_Tor_3rd
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
100183237
NCBI-ProteinID:
XP_018667706
LinkDB
All DBs
Position
5:complement(2015438..2024223)
Genome browser
AA seq
1042 aa
AA seq
DB search
MGSAPSKPPRRIRTARSFVSTSSVSSLNSLETEIDDEEIRVRDITFDDVTTNSFQVTWSP
PTNMQGKEVTYQLRIFPPEKIKSKTMIKGHASTSYTFTKLKGGTSYTVDVVPQVEDGQLG
CTTNAHVATKPHPPRDLKFGKVESNLFELQWSHAKGRRSSYACRLSPPDDVTSDTDVTGL
RKTSHLFKGLVPGTKYTVTVSTVTNGVHSEAASISMITAPRHVCDLTFHDVTHHEMSIKW
KKPEGFVESYSLELSETENRTKNPVVINKLTRTHNTFNGLTAGRLYECKVTCHAHDISSR
PQLFTECTVPLEVAGIVPCDVKADEVQITWAPSPGDVDDYDLYLSPKEGVEGNTQPRGVK
GNRYQFTGLVPGTTYTVGIVTNAKNKSSKRAIASFVTEPGMCGDIEYTIKTCTSQHIQWP
PAAGRIDSYTLRVRREDKQDDGRNIEDLYKPYYVIDDLQPGSLYCIQVVALRDSRESSTV
SGTFSTKPSTVPSLFFPRDVSTWESITCSWEPSLGGVENYRLTAKCKGSPEKQAIVSADS
ADFTFTKLRPSTSYTFCIFAISNQLESEVTTNSFTTGPNCVENLRVESATKREIDVRWSA
PDAGADEYKVTIECLEESENKTPFSEVVTSTSHVFGRLVPGSLYKVEVTPRARNVGGKPT
TIEAYTKPGAVLNVNIPIDDVTQQSFNVMWWGVEGHCNDVTITLSKLKTEDDTEIAVPAI
IQEYQVNACGDKSTEQKFENLDPGTLYGVRLHASGKAGIGDDAIVTQSTLAPPKKIDRFV
VEPVVDDPLLKNIETTEEPEKPIEVTENKTPELAEVPVIETSPEPVIEPPPAEPVETQTP
AEPLVETPPAEPVIETPPADPVETQTPAEPVVEIPEEPITEPPNEPEAPSDPIIETPIEP
VIEPVIEPPEIIIEPPADEPVVEAPVEPVIEKRIEPIIEPEAPPVEPVTEQPVSKPVEPE
EAENTPSSPTLNEPIVPTITHTPPTPTTPPAHIDLSLPTPTPSPIRPVAIFGSSNNELKG
VQSEKKEEADSKPLSFLATLTS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcacccagtaagccaccacgtcggatacgaacagctcgttccttcgtttcg
acgtcatcagttagctctctgaactcattggagacggaaattgatgacgaagaaattcga
gtgcgtgacatcacattcgatgacgtcacgactaattcattccaagtcacgtggtcaccg
cctactaacatgcaaggcaaagaagtgacgtaccagcttcgaatttttccgccagaaaag
ataaaatccaaaactatgataaaaggtcatgccagtacgagctatacattcacaaaacta
aaaggtggtacaagttacactgtggatgtagttccacaagttgaagacggtcagcttggc
tgtacaaccaacgctcacgttgctacaaaaccccacccaccaagggatttaaagtttggc
aaagtagaaagcaacttgttcgaactacagtggagtcacgccaagggcagacgaagtagt
tacgcatgcaggctgtcaccacccgacgacgtgacgtcagatactgacgtcactggatta
cgtaaaacgagccatctgtttaaaggtttagttcccgggacgaaatatactgtcacggtg
tcaacggtaactaacggtgtacatagcgaagctgcgtcaatttcaatgataacagcacca
cgtcacgtctgtgacctcacgtttcatgacgtcactcaccacgaaatgtcaatcaagtgg
aagaaaccggaaggttttgtggaaagctacagcctggaattgtctgaaaccgaaaacaga
acaaaaaatcctgtcgtaataaacaaactgacgagaactcacaacacatttaacggctta
actgctggaagattgtacgaatgtaaagtaacttgtcatgcccatgatatatccagtagg
cctcaactgtttacagaatgcacagtcccactggaagtagctggcattgtaccgtgtgac
gtcaaagctgacgaggtacagatcacgtgggctccttccccgggtgacgtcgacgactac
gacttgtatctttcaccgaaagaaggggtcgagggaaatacccagccaagaggggtgaaa
gggaatcggtatcaattcactggtttggttcctggtacaacctacacggtaggaatcgtc
acgaatgcgaaaaataaaagcagcaagagagcgattgcaagctttgttacagaacctggc
atgtgcggtgatattgaatacacaataaaaacttgcacaagtcaacacatacagtggcct
cctgcagctggaaggatagattcatacactcttcgtgtcaggcgagaggacaagcaagac
gacgggcgtaatattgaagatctttataaaccttattacgtcatcgatgatcttcaaccc
ggaagtctctactgcatccaagtggtagcattgagagatagcagggaatcgtcaactgtc
agtggaacattttctacaaaaccatctaccgtcccttcccttttcttcccgcgtgacgta
agtacatgggaatccatcacctgctcatgggagccgagtttggggggcgtggaaaactat
cgacttacagctaagtgtaaaggaagtccagaaaagcaagctatcgtttcagccgattct
gcagattttacctttacaaagcttcggccctctacatcttataccttctgtatcttcgcc
ataagtaatcaactggaaagcgaagttacaactaattcgttcacaacaggaccaaactgc
gttgaaaatctacgagttgaatctgcaaccaagcgtgaaattgacgtcaggtggtctgca
cccgacgcaggggcggatgaatataaagtgacaatcgaatgtttggaagaatccgaaaat
aaaactccgttttcggaagtggtaaccagcacaagtcacgtgtttggtagacttgtacca
ggctctttgtacaaagtagaagttacaccacgagcaagaaacgttggagggaaaccgact
accattgaagcttatacgaaacccggtgcagtgttgaatgtcaatattccaattgatgac
gtcacacaacagtccttcaacgtcatgtggtggggggtggagggccactgcaatgacgtc
actattactttaagtaaactgaagacggaagacgatactgagattgctgttccggccatc
atccaggagtaccaagtcaatgcgtgtggggacaagtcaactgagcagaaatttgaaaat
ctagatcctggaactttgtacggtgtgaggctgcatgcgtctggtaaagccggaattggc
gatgacgcaatcgtgacgcaatctacgctggcgccgccaaaaaagattgatcgcttcgtg
gtggaaccggtggtggacgaccctttgttgaaaaatattgaaacaacagaagaaccggag
aaaccaattgaggtaactgaaaataagacaccggaactagcagaggttccagtaattgaa
acatcacccgagccagtaattgaaccaccaccagcagaaccagtagagacacaaacacca
gcagagccactggttgaaacaccaccagcagaaccagtaattgaaacaccaccagcagac
ccagtagagacacagacaccagcagagccagtggttgagataccagaagaaccgattaca
gaaccacctaatgaaccagaggcaccctctgacccaataattgagacaccaattgaacca
gtaattgaaccagtgatcgaaccacctgagatcattattgaaccaccagctgatgaacca
gtagttgaagccccagtggaaccagtaatcgaaaaacggattgaaccaataattgaacca
gaagcaccaccagtcgaaccagttactgaacaaccagtctctaaaccagttgagccagag
gaagcagaaaatacaccaagcagtccaactttaaatgagccaattgttcccactataacc
catacacctccgaccccaacaacacctcctgcacatatcgacttatctcttccaactcca
accccatcacctatacgacctgtagctatatttggaagctctaataatgaattgaaaggg
gtgcagtcagagaaaaaagaagaagcggattcaaagcctttgtcgtttcttgcaacgcta
acgtcttag
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integrated database retrieval system
