Ciona intestinalis (yellow sea squirt): 100183239
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Entry
100183239 CDS
T01056
Name
(RefSeq) serine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100183239
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100183239
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100183239
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
100183239
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100183239
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100183239
Prokaryotic type
100183239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
100183239
NCBI-ProteinID:
XP_002127248
Ensembl:
ENSCING00000009335
UniProt:
F6Z423
LinkDB
All DBs
Position
5:2002235..2008976
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AA seq
506 aa
AA seq
DB search
MVLDLDLFRKDKGGNPEKIRENQSKRYKDVKLVDNLVEADTEWRKCRYSLDNFNKQKNQC
SKAIGLKMKKKEPIGEDDTLPEDFPPLEEITNEVLANLTVCQIKKVRLLVEEATTKCDQR
RIELEGIRLKNLREIGNHLHSSVPVSNDEDADNRIERTIGDCTTRKKYSHVDLVVMVDGY
EGERGAVVAGSRGYFLKGPLVFLEQALINFALQRLANNGYVPLYTPYFMRKEVMQEVAQL
SQFDDELYKVVGKSSEKAEDGGTDEKYLIATSEQPIAALHRDEWLEPEKLPIKYAGFSTC
FRQEVGSHGRDTRGIFRVHQFEKVEQFVYSSPETSWQHFDEMIATAEGFYKDLGIPYHIV
CIVSGALNHAAAKKLDLEAWFPGSGAHRELVSCSNCLDYQARRLKVRFGQTKKMMEKVDY
VHMLNATMCATTRVICAILENYQTEEGIVIPEVLKSFMPQQYRDMIKFVRPAPIDEEEAK
KKKKKSGKKGADGDITNEMKKMDVKS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtacttgatttggacctgttccgtaaagataaagggggcaaccctgaaaaaatccga
gagaaccaatcgaaacgttacaaggacgtgaaactcgttgataatctggtggaggctgac
accgagtggcgaaaatgccgctactcattagacaatttcaacaagcaaaagaatcaatgc
agtaaagcaattggtttaaaaatgaagaaaaaagaaccaattggagaagatgatactttg
cctgaggattttccacctttggaagaaataactaatgaagtcctagctaatttaacagtt
tgccaaataaagaaagtaagattgttggttgaagaagcgacaactaaatgtgatcaacgt
agaattgaacttgagggaattcgactcaaaaatttgagagagattggaaaccatctgcat
agttctgttcctgttagcaatgatgaggatgctgataatcgaattgaacgaactattggt
gattgcacgacaagaaagaaatattcccacgttgatcttgttgtcatggttgatggatat
gaaggggaacgaggggcagtagtggcgggaagcagaggttactttcttaaaggtcccctt
gtgtttcttgaacaagccctgattaactttgcattgcaaagacttgcaaataatggttat
gttcctttgtacacaccatacttcatgcggaaagaagtcatgcaagaagttgcccaactt
agtcagtttgatgatgaactttataaggttgttggtaaatcaagcgaaaaagctgaagat
ggtggaactgatgagaaatacttgatcgctacaagtgaacaaccaattgctgccttgcat
agagacgaatggctagaacctgagaaactacctatcaaatacgcaggtttttctacttgt
ttccggcaagaagttggttcgcatggaagggacactagagggatattccgtgttcatcag
tttgaaaaggtggaacaatttgtttattcttctcctgaaacttcatggcagcattttgat
gaaatgattgcaacagctgaaggtttttacaaggatcttggcattccatatcatatagta
tgtattgtatctggtgcattaaaccatgcagcagcgaaaaaattagatttggaagcttgg
tttcctggttctggagctcaccgtgagcttgtgtcatgctcaaactgcctcgattaccaa
gctagacgtcttaaagtgagatttggacaaactaagaaaatgatggaaaaggtcgactat
gtgcatatgttaaatgctacaatgtgcgcaacaacacgcgttatttgtgcaattctagaa
aattatcaaactgaagaaggaattgttattccagaagttcttaaatcattcatgccacaa
caatatcgagatatgattaagtttgttcgtcctgcgccaattgatgaagaagaagcgaag
aagaagaagaaaaagtctgggaagaagggggcagatggtgacatcacgaatgagatgaaa
aaaatggatgttaagagttaa
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