Ciona intestinalis (yellow sea squirt): 100183250
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Entry
100183250 CDS
T01056
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00071
Fatty acid degradation
cin01212
Fatty acid metabolism
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
100183250
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100183250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100183250
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
100183250
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100183250
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
DNA-PKcs_N
Motif
Other DBs
NCBI-GeneID:
100183250
NCBI-ProteinID:
XP_026693433
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Position
14:2687918..2709419
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AA seq
840 aa
AA seq
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MAEAHAAVAFSFSVTQEGLNVQISHEAMQAVYFSGVRSWRKRLTRFRNRVLSGVFPVKYT
SLVGLTAIVLLASFLSYDITWGFNEKVHGWLFSSKSFITWNTSYLVSSTLLWLLAVLVIR
YLLKLLLCYQGWMFEPRGKMSLKTKLWAVSYLQLLCYFTQNVMFLLIQILSFHSSNRWEQ
YVYLAGRGPIMVNSNYYGMDLLYHNPTPVQASRAANIVHAMFAFRSTLDKELIKPIKVNG
VVPLCSAQYERVFNSCRTPGVEAGIYPCDFEDVEQLGTLLCLKSEDKEKEIQGISKFELK
FSHSTLQIGGSSMYILAGRGPIMVNSNYYGMDLLYHNPTPVQASRAANIVHAMFAFRSTL
DKELIKPIKVNGVVPLCSAQYERVFNSCRTPGVEADRICHWSDCRHIAVYHQGRWFKMTC
YKNGVLLEPSEMEIQIESILNDTSPPCEGEEHLAALTAGERIPWAKARNTYFVDGVNKKS
LHAIEKAAFILVLDDEEHVVSDEDSASLSKYGRSLLHGKCYNRWFDKTFNCIVFKNGRWG
INAEHSWADAPIMSYVVEEALGFEYQSLGYTQDGRVKGRPTVQPITPHRLQWQLTPECQE
VIETSLSVANNLADDVHLNVSAFKHFGKGLVKKFKMSPDAFIQAALQIAHLRDKGRFSLT
YEASMTRLFREGRTETVRSCTSEMCAFAKSMEDDSFTNKDRYALLKKAVDRHINGYKEAM
TGQGIDRHIFCLYVVSKYLKLESPFLQKVLSEVWRLSTSQTPVDQVGRSVLRNNKEMTPT
GGGFGPVADDGYGVSYIICHENLIMFHVSSKYSSSETDSDRFAGNIEKAMLDLRNLCESM
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctcatgccgctgttgcgttttcattttctgtaacacaagaaggtctcaat
gtccaaatttcccatgaggcgatgcaggctgtctatttttctggtgtaagatcatggcgg
aaaaggttgaccaggttcagaaaccgtgtactgagcggagtatttcccgtcaaatacaca
agccttgttgggctcacagctatcgtcctgttggcttcgtttcttagctacgacattact
tggggttttaatgaaaaagttcatggatggttgttctcttcgaagtcattcattacatgg
aacacatcatacttggtttccagcacattactttggctgcttgctgttctcgtaatccgt
tatctgctaaaattacttctatgttatcaaggttggatgtttgaacctcgtggaaaaatg
tcgctcaagaccaaactatgggctgtgagttatctccagttgttatgttattttacgcaa
aatgtgatgtttctccttattcaaattctctcattccactcttcaaataggtgggagcag
tatgtatatcttgctgggcgtggtccaattatggtcaattcaaattactatggaatggac
cttctgtaccataacccaactcctgtacaagcatctcgcgctgccaatatagtacatgct
atgtttgcattccgttcaacactggataaagaactcattaaaccaattaaagtaaacgga
gttgtcccattatgcagtgctcaatatgaaagagtgtttaactcctgtagaactcctggt
gttgaagcaggtatctacccttgtgattttgaagatgttgaacaacttggaactctcctt
tgccttaaatcagaagataaggagaaggaaatacaagggatttcaaaatttgaactcaaa
ttctctcattcaactcttcaaataggtgggagcagtatgtatatccttgctgggcgtggt
ccaattatggtcaattcaaattactatggaatggaccttctgtaccataacccaacccct
gtacaagcttctcgcgctgccaatatagttcatgctatgtttgcattccgttcaacactg
gataaagaactcattaaaccaattaaagtgaatggagtggtcccattatgcagtgctcaa
tatgaaagagtgtttaactcctgtagaactcctggtgttgaagcagaccgtatttgccac
tggtccgattgtcgtcacattgctgtataccatcaaggtcgttggtttaagatgacctgt
tacaagaacggggttcttctcgagccaagtgagatggaaatccagatcgaatcaatcttg
aacgacacgtcccccccttgtgagggagaggaacacttggcagcattgactgctggagag
agaataccatgggcgaaggcacgcaacacatactttgtcgacggcgttaacaagaaatct
cttcatgcgattgaaaaagctgcgtttattctcgtcctcgatgatgaggaacacgtggta
agcgatgaagactcagcttcgttgtcaaaatatggtcgatcgctcttacatggaaaatgt
tataacaggtggtttgacaaaaccttcaactgcatcgtcttcaagaacggaagatgggga
atcaatgctgaacattcatgggcagatgccccaatcatgagttatgtggtggaggaagca
cttggctttgaatatcaatcccttggttatacccaggatggtagagtaaaaggcaggcct
actgtacaacccatcacgcctcatagattacagtggcaacttacaccagagtgtcaagaa
gtgattgaaaccagtctttctgttgcgaataacctcgcagatgatgttcaccttaatgtg
tcggcattcaaacacttcggaaaaggactcgtgaagaagtttaagatgtctccagatgct
ttcatacaagctgcattacaaatcgctcaccttagagacaaaggtcgtttctcgttaaca
tacgaagcctcaatgacaagattgttcagagaaggtaggacagagaccgtaagatcatgc
acgagtgaaatgtgtgcgttcgctaaatctatggaggatgacagcttcactaacaaggac
cgatatgctttgcttaagaaggccgttgaccgtcacattaatggttacaaggaagcaatg
acgggacaaggcattgaccgtcacatattttgtctttatgtggtgtcaaaatatctcaag
ttggaatctccattcttgcagaaggtattaagtgaggtttggagactttccacctctcag
accccagttgaccaggttgggaggtcagtcttaagaaataataaagaaatgaccccaacg
gggggtggttttggtccggttgccgatgatggttatggtgtctcttacatcatctgccat
gagaatcttatcatgtttcatgtttcaagcaaatattcttcatcagaaacggactctgac
cgatttgctggcaatattgagaaagctatgcttgatctacggaacctgtgtgagagcatg
taa
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