Ciona intestinalis (yellow sea squirt): 100183267 Help Entry 100183267         CDS       T01056                                  Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     100183267  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cin03400]     100183267 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      100183267 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_II MutS_IV MutS_I TPR_HPS5_insect AAA_22 AAA_27 Motif Other DBs NCBI-GeneID:  100183267 NCBI-ProteinID:  XP_002126892 Ensembl:  ENSCING00000006286 LinkDB All DBs Position 10:complement(3806802..3818680) Genome browser AA seq 958 aa AA seqDB search MYTSRCSLGTYYILMANLQAKAKWSIDDQVGFFKFCDSLPEKADATYRVFDHGEFYSSHS KDADLAAKHIFKSSTAVKELGKKDAKVPTVFLSQLNFESLARDLLLVMQYRLEVYRQLSN RKWELAYKASPGNLNEVEDILFKNVDIGDQTSSAVISVKYTLAAGGQSTVGLAYVDTRSC EVMYAEFSDNDHFSNLESAIIQLGPKECIVPKLDTSHEASKLSEVIKRSGLLITERPKSD FSTKDLAQDLKRLIKTKKKQSDQDEVPVGASWTSDHPLASSSLSSLIRYLELMSKEENFG EFRIRKFELSQYMKLDSAAYSALNLFPERTAQGVAQNSKPVDSLYGLLNYCQTVQGQRLL SRWIKQPLIDVNILEERLSIVEAFVDCSELRRSLVDEHLKKLPDFDRLSKKFHRKKATLQ DSYRVYQAIKQMPYVCESIGRHAEALENNYNLLRETFLNPIHQLSLDFEKFTEMLETTLD FKLIEKHEFMVKCDFDPELKRLRVKMDDIEEEMNESFTQAADQLGLEKGKSIKLELAPQF GYVFRVTCKEEKSLRQNKKFTTLDTNKAGVRFVNTQLQQLSDDYQDCRAAYEAQQDAVVM EIMTIACGYAEPMRSLGDVIAKLDVLLSFAQAAVTAPTPYVRPVLQPLGTGSNLIKLDQC RHPCVERQDDVSFIPNDLLLKKNEHNFIIVTGPNMGGKSTYIRQIGVAVLMAQIGCFVPC GGATVTLVDAILARVGAGDCQAQGVSTFMAEMLETSSILRSATSNSLIIIDELGRGTSTY DGFGLAWAISRHVALEIRAACLFATHFHEMTSLADEVTSAVNYHVTALTSSNENVDSHIT MLYQVKPGSCDKSFGIHVAECVDFPLSVINAAKRKAAELEDCYVTDTSKEDDDGRKRRKT KSDGEEIVRDFLRAVKREQWNKLSESEACAKFSELKRTVASSDNEYVAGILRGLEAQT NT seq 2877 nt NT seq  +upstreamnt  +downstreamnt atgtacacatctaggtgcagtttagggacatattatatactaatggccaacctgcaggcc aaagcgaagtggtcaattgatgaccaggttggcttctttaagttctgtgactcattgcca gagaaagcagatgccacatacagggtatttgatcacggtgaattttactcttctcacagc aaagatgcagacctggcagcaaagcatatctttaagtcttcaactgctgtaaaagaactt ggaaaaaaagatgctaaagttcccactgtatttctaagtcaactaaattttgaatcgctt gcaagagatcttttgttggtgatgcaatatcgccttgaggtgtatcgacagttgtccaat cgtaaatgggaactcgcatacaaagcttcacctggcaacctcaacgaggttgaagatatc ctgttcaaaaatgttgacattggagaccagacatcatctgcagttatcagtgttaagtac acacttgctgccggtggccaaagtacagtaggtcttgcgtatgttgacactagatcatgc gaggtaatgtacgcagagttctccgataatgatcatttctccaatctcgaatctgctatt atacagctgggtcctaaggaatgcattgtgccaaaactggacacctcccatgaagcatcc aaacttagcgaagttatcaaacgaagtgggttgttaattacagaacgaccaaagtcagac tttagcacaaaagacttggcacaggatttgaaacgattaataaaaactaaaaaaaagcag tctgaccaagatgaagttccagtaggagcatcatggacatcagatcatccccttgcatcc tcttcactttcctccctcatccgatacctggagctcatgagcaaggaggaaaatttcggg gaattcaggatccgaaaattcgaactttcccaatacatgaagttggacagtgcggcgtat tctgcgcttaatttgttcccagagcgcaccgcacagggagttgcacagaactctaaacca gttgattcattatatggcttactgaactattgtcagacagtacagggccagaggcttctc tcacggtggattaaacaacctcttattgatgtcaacatcctggaagagaggttgagcatc gtagaggctttcgtagattgctccgaactaagaagatcattagtcgacgaacatcttaaa aaacttcctgattttgacaggctttctaaaaaattccaccgcaaaaaagcaactttgcaa gattcctatcgtgtttatcaggccataaaacagatgccatatgtctgtgaaagcataggc agacacgcagaagcgttggaaaacaattacaacttgctacgtgaaacttttcttaaccca attcaccaactatctttggattttgagaaatttacagaaatgttggagacaacactcgat tttaaactgattgagaagcatgagtttatggttaaatgcgactttgatcctgaattgaag cgactccgtgtgaaaatggacgacatagaagaagaaatgaatgaaagtttcactcaagct gccgatcaacttggtttggaaaaaggaaaatcaataaagcttgaactcgccccacagttc ggctacgtgttccgcgtcacttgtaaagaagagaaatcccttcgacagaataaaaaattc acgactcttgatacgaacaaagctggagtaaggttcgtcaatacacaactacagcagctc agcgacgactaccaggactgtcgagccgcgtatgaggcacagcaggacgctgttgtcatg gagattatgacgatagcatgcgggtatgctgaacctatgcgatcgctgggtgacgtcatt gcaaaactggatgtattgttgtcatttgcccaggctgcagtcaccgctcctactccgtac gttcgtcccgttcttcagccgcttggaactggttcgaacctgattaaactggaccagtgc aggcatccatgcgtggagaggcaggacgacgtgtcatttattcctaacgatttgctgctg aaaaaaaacgaacacaactttattattgtaacaggtcctaacatggggggaaaatcgaca tacattcgtcaaataggagtcgctgttctaatggcgcagatcggttgttttgttccgtgt ggtggcgctacagtgacgctggtcgatgcaatcttagcccgtgtcggcgccggtgattgc caggcgcaaggtgtatccactttcatggcagaaatgttggaaacctcgtccattctacgt tctgcgacgtccaattccctcataatcattgatgaactcggtcgtgggacgtcaacttat gatggttttggcctcgcatgggctatttcccgccacgtggcactagagatcagagctgct tgcctctttgcaacacactttcacgagatgacgtcactggcagatgaggtgacgtcagcg gtgaattaccacgtcacagctctgacgtcatcaaacgaaaacgtcgattcccatataacg atgttgtaccaagttaaaccaggttcatgcgacaagagctttggtatccacgtagcagaa tgtgtggatttccctctttcagttataaacgccgccaagcgtaaggcggcagaattagag gattgttacgtcactgatacgtcaaaggaggacgacgacggaagaaaaaggagaaaaaca aaatcggacggtgaagaaattgtgcgagatttcctgcgtgcagtgaagcgtgaacagtgg aacaaactttcggagtccgaagcttgcgcgaagttttccgaactcaaacgcacagttgct tcttctgacaacgaatacgtagcaggcattcttcgaggcctggaagctcagacttag

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