Ciona intestinalis (yellow sea squirt): 100183284
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Entry
100183284 CDS
T01056
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
cin04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100183284
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100183284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100183284
Spliceosome [BR:
cin03041
]
Complex B
Other components
Prp19-related factors
100183284
Complex C
100183284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
100183284
NCBI-ProteinID:
XP_002129889
Ensembl:
ENSCING00000008407
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MALLSSLLPEPTQVTYDQIGSFQPTTRAVVSTKFQPPPYGHRKGFIPRAERDFGDGGAFP
EIPVVQFPMGMGKNKKKSEALAVQLDPEGKIKYDAIARQGHSKDRVVHSKFQQLVPKEIL
NEDDPDLQRPDEEKIKEQTEATRLALEKLTNEKISAAMPVKRAEQRAPAQYIRYTPSQQG
AGFNSGAKQRVIRMVEMQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKVTVKEQQDW
KVPPCISNWKNAKGHTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMR
AHVERKIASKEKEAKERQLRQLAEEARNKRSGIRKEDKDDKEMKERDEIRKERHHERQRQ
RNIERAAPEKRSRLREERDISEKVALGLPNTRAGQEVQFDQRLFNKTKGMDSGFAGGDDE
GYNVYDKAWRSETQIGNSIYRPTKDKDKEMYGDDDIDKLIKSNKFVPDRGFKGADSSQQR
EGPVQFEKDEDLFGLNKFMEQAKQARKRPTESGSKSKSDHDKKRSRKGE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcattactatcaagccttctacctgagcctacccaagtaacctatgaccagatcggc
tcatttcaaccaacaacaagagctgttgtctcgaccaagtttcaaccaccaccatatgga
catcggaaaggatttattccaagagctgaacgtgattttggtgatggaggagcttttcct
gaaattcctgttgtccagtttccaatgggaatgggaaaaaacaaaaaaaagtcagaagct
cttgcagttcaactcgatccagaaggcaaaataaaatatgatgccattgcaagacaaggg
cacagcaaggatagagttgttcattcaaagtttcaacaacttgtgcccaaggaaattctc
aatgaagatgatcctgaccttcaacgacccgatgaagaaaaaataaaagagcaaacagaa
gcaacacggttagcactagaaaaacttacaaatgaaaagatttctgctgcaatgccagtt
aaaagagctgaacaacgagcacctgcacagtatatcagatacacaccatcccaacaaggg
gcagggttcaactccggtgcaaaacaacgagttattagaatggtggaaatgcagaaagat
ccaatggaaccaccaaagtttaaaacaaacaagaaattaccacaaggtccaccgagtcca
ccggcaccagtaatgcattccccaaatcgtaaagtaaccgtgaaggaacaacaagattgg
aaagttccaccttgtatttcaaactggaaaaatgctaagggccacacgattccacttgac
aagcgacttgcagctgatggtcgaggtttacaaagtgttcacatcaatgaaaactttgcg
aaacttgctgaagcactttatatcgctgatagaaaggcgagagaagctgttgagatgaga
gctcacgttgagaggaagattgcttccaaggagaaggaagcaaaagagcgtcaacttcgt
caactcgcggaggaagcaaggaataaaagatccgggatcagaaaagaggacaaagatgac
aaagaaatgaaggagagagatgaaatacggaaagaaagacatcatgaacgacaaagacaa
cggaacattgagcgtgctgctcctgaaaaaaggagtcgattacgagaggaacgcgacatc
agtgagaaagttgctcttggtcttccgaatacaagagctgggcaagaagtacagtttgat
caacgactttttaataaaaccaagggcatggacagtgggtttgcaggtggtgatgatgaa
ggttataatgtttatgacaaagcatggagatccgaaacacagattggcaacagtatttat
cggccaactaaagacaaggacaaggaaatgtatggagatgatgatattgataaactcatc
aaaagcaacaagtttgtaccggatcgtggattcaagggtgctgactcgtcccaacaacga
gaaggtcccgttcagtttgaaaaagatgaagatttattcggacttaataagtttatggaa
caagctaaacaagcacgaaaaagaccaactgaatcaggaagtaaatcgaaatccgaccat
gataaaaagagaagtcggaagggggagtga
DBGET
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