Ciona intestinalis (yellow sea squirt): 100183287
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Entry
100183287 CDS
T01056
Name
(RefSeq) probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00280
Valine, leucine and isoleucine degradation
cin01100
Metabolic pathways
Module
cin_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100183287
Enzymes [BR:
cin01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
100183287
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
Motif
Other DBs
NCBI-GeneID:
100183287
NCBI-ProteinID:
XP_002120696
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MWKCGSSLKRLGLRPVTICSNRQKASAISHVLRSDIPQIYHHIRDQNRSNIQRLKIKYDA
LLHRAMMGGGKKGIENHVKRNKKLLIRDRIRLLLDENEPTLELSALAGLDLEYGDVPCAG
VVTMIGKVNGIWCMIVANDATIKGGTIFPITLKKQLRAQEIAKENRLPTIYLVDSGGGFL
PLQAQIFNEGGKCFYNEAVMSAAAIPQAAIVCGSCTAGGAYVPAMAEESVILHKTGTIFL
GGPPLVFAATGERITSEELGGATLHCKVSGCTDHFAQTEEDAIITMRDIVATMNQQEEIN
EDTYEEPLCDVSLLNDLAPCKMNGYQLDGRHMLACVLDGSRFHEFKKYYGPTLITGFGLV
KGKLAGFAVSNGRITESTALKGSHFTQLCSQRKIPMVFLQNFSQDSTHPPVHTLEQSSKL
IKAQCQLMQAIACSTSPSITITTGGICGSLESHSLGSLAMGSRFHFVYPNVRVGGYSPEY
MADTMQNTKDKQHDYLEQFMTETDSFHAAARIRNDGVILPFDTRDIINKCLRIFKQNNEI
SVTDLQKTLRM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaatgtggatcaagtttaaaacggctggggttacgtcccgtaacaatatgtagc
aaccgtcagaaagcaagtgcaatatctcatgttcttagatcagacatacctcaaatatat
catcatataagggaccaaaaccgctccaacattcaacgattaaagataaaatacgatgca
ttacttcaccgtgcaatgatgggaggtggtaagaaagggatcgaaaatcatgtaaaaaga
aacaaaaaactcttaattcgtgatcgaattcgacttttacttgatgaaaatgaaccaacg
ctggaactatcagctctcgctggattagatcttgagtatggagacgtaccttgtgctggt
gttgtcacaatgattggtaaagttaatggcatttggtgcatgatagtagcaaatgatgca
actataaaaggaggtaccatatttccaataacactaaagaaacagttacgagcacaagaa
atagcgaaagaaaatcgattgccgacaatttacttggttgatagtgggggtgggtttcta
cccttacaagcacaaatattcaacgaaggtggaaaatgcttttacaatgaagcagttatg
tcagctgctgccatacctcaagctgctattgtgtgtggttcatgtactgctggtggtgca
tatgtgccggctatggcagaagaatctgtaattctgcataaaacaggaaccatctttctt
ggcggacctccgttggtgtttgcggcaacaggagagaggatcacatcagaggagttagga
ggagcaactcttcattgtaaagtgagcggatgtacggatcattttgctcaaactgaagaa
gacgcgattattacgatgagagatattgtggcaaccatgaaccaacaagaagaaattaac
gaagatacatacgaagagccattatgtgacgtgtcattactcaacgaccttgccccatgt
aaaatgaacggataccaacttgatggtcggcatatgcttgcttgtgtattggatggtagt
cgattccatgaattcaaaaaatattacggaccgacacttattactggatttggtttggtc
aaaggaaaattagcaggttttgctgtcagtaatggaagaataacagaatctactgcattg
aaaggctcccactttacccagttatgcagtcagcgtaaaataccgatggtgtttttacaa
aattttagtcaagattcaacacacccccctgtgcatacactggaacagagtagcaagtta
attaaagctcagtgccagttaatgcaagcgatcgcatgttctacatctccatcaatcacc
atcacaactggtggtatatgtgggtcacttgaatcgcattcacttggttcacttgctatg
ggttccaggtttcactttgtttacccaaacgtgcgtgttggcggatattcacctgagtac
atggcagatactatgcagaacaccaaggataaacaacatgattatttagaacaatttatg
acagagaccgattcatttcacgctgctgctagaattcgtaatgatggcgtgatattacca
tttgatacacgagatattattaataaatgtttaagaatctttaagcaaaataatgaaata
agtgttactgatttgcaaaaaacattaagaatgtaa
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