Ciona intestinalis (yellow sea squirt): 100183293
Help
Entry
100183293 CDS
T01056
Name
(RefSeq) transcription elongation factor A protein 1
KO
K03145
transcription elongation factor S-II
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100183293
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100183293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
100183293
NCBI-ProteinID:
XP_002120544
UniProt:
F6XTV8
LinkDB
All DBs
Position
1:5332242..5334643
Genome browser
AA seq
298 aa
AA seq
DB search
MSTSNEEEVLYIAKKLDKMVSKKSADNALDVLKALKQIPINLDTLQKTRIGMSVNNIRKQ
TANDEVAIAAKQLIKGWKKLVSEPSSASKKSEDNKKKEKPEPIISTNIRKTSTTKMEVSA
SSHTMDTSSLQSTGNSVRDKCREMLVRGLQTDNTSGHSDQQCAFLAAAIEEAIYSEFKDT
GVKYKNRIRSRFSNLKDTRNSILRLNVLNGILKPEQIAKMTAEEMASDEMKKKREEYEQQ
NIKDHQMSVNEGTKTDMFVCGRCKGRACTYNQLQTRSADEPMTTFVFCTECGNRWKFC
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagtaacgaagaagaagttttgtacatagccaagaagctcgataaaatggtt
tctaaaaaatctgcggataatgccttggatgtcttgaaggctctgaaacaaattccaata
aacttagacacactgcagaaaactcgtattggtatgtcagttaataatataagaaaacaa
actgcaaacgatgaggttgcaatagcagcaaaacaacttataaagggttggaagaagttg
gtttcagaacccagttcagcgtcaaagaaatctgaagataataaaaaaaaggaaaaaccc
gaaccaataatatcaaccaatatccgaaagacaagcacaacaaaaatggaagtttctgct
tcatctcacacaatggacacctcatcacttcaatccacaggaaattccgttcgagataaa
tgtcgtgaaatgttggtacgaggattgcaaacagataatacatcgggccacagtgaccaa
caatgtgcatttcttgctgctgctattgaagaagctatctactctgaatttaaagataca
ggagtgaaatacaagaacagaatacgaagcagatttagtaacttaaaagacaccagaaac
tccatccttcgactgaatgttctcaacggtattcttaagccagaacaaatcgccaaaatg
accgctgaggagatggcgagtgacgaaatgaaaaagaaaagagaggaatacgagcaacag
aacatcaaagatcatcagatgtctgtcaacgaaggaacgaagactgacatgttcgtatgc
ggtcgatgcaaaggacgggcatgcacatacaatcagctgcaaacgagaagtgctgacgag
cccatgacaactttcgtcttctgtactgaatgtggaaacagatggaaattctgttaa
DBGET
integrated database retrieval system
