Ciona intestinalis (yellow sea squirt): 100183313
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Entry
100183313 CDS
T01056
Name
(RefSeq) complement component C6-like
KO
K03995
complement component 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
MACPF
TSP1_spondin
Ldl_recept_a
TSP_1
TSP1_CCN
TSP1_ADAMTS
PROL5-SMR
Motif
Other DBs
NCBI-GeneID:
100183313
NCBI-ProteinID:
XP_002124120
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Position
3:4840480..4845304
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AA seq
564 aa
AA seq
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MKPLTSVFLLVLLCCMFETNEAWGRRRRRRAPPPRVNCAVSGWGEWGQCSQSCGEGVMTR
SRKITRHPMHGGTACPTLKSSASCTVRPCPVFSCSWTAWGNWSECYSCSSERSRFRNVSV
AAMFGGETCVGRDYQIDRGCPQDKPCTTTCPEGYFSCADGITCINSNLICNDDDDCTDNS
DELDCGSKITSPCADNQYSHIPNIGLAGAGFDITEGKVAGQILDNNRFNGRCILIRSGDH
MTVFRKPANVQYYGFQVNVDSSFSTSAYNSAEQYVEEEKRRTDDKINTGSSVGFPGFGRV
SVQSSFTKNSNMRKIVKQSSNKDAKFFRVSSTVKLAQFSIVRGNYILSHNFRRRLRNLPE
HYDYLKYLQVIIDFGTHFCSAGTLGGKYEYIYRYSKSQLEKSKLSDSEQRHCLSMEASVK
FFGSGVSGGSTSCSSNALSQSHGSSFTKSAEDVISNVIGGYSGKAASLSFSNDPNDNDYD
AWVETVKHNPSIIDYEITPMSAVITNPTKRRNMERALYLYMAKYDVVACKGKCYNGAAKI
VTDNGKTCTCLCKFPYTGVDCHNE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgctaacttcggtttttctgcttgtgcttctatgctgtatgtttgaaacaaac
gaagcttggggaagacgacgacgcagaagagcacctccaccaagagttaactgtgctgtt
tccggttggggcgagtggggacagtgcagtcagtcatgtggagaaggtgttatgacacga
agtagaaaaataacaagacatccaatgcatggtgggactgcatgtcctacactcaagagc
tctgcatcatgcactgtacgaccgtgccctgtgtttagttgcagctggacagcttgggga
aattggtcagaatgctattcatgctcttcagaaaggagccgattcaggaacgtgtcagtt
gctgcaatgtttggtggggaaacatgtgtcggaagagactaccaaatagatagaggatgc
ccacaagataaaccttgtacaactacttgtccagaaggttacttctcttgcgcagacggt
attacatgcataaattcaaatctgatatgtaacgatgatgacgactgcactgacaattcc
gacgaactagattgtggctcgaaaatcacttcaccgtgtgcggataaccagtattctcat
atccctaatatagggctggcaggagcagggtttgatattactgaaggtaaagtagccggt
caaatacttgacaacaatcgtttcaacggccggtgcattctgatccgcagtggagaccat
atgacagtatttcgtaaaccggccaacgtacaatattacggatttcaggtaaacgtagat
tcaagtttctccacaagcgcttataacagcgctgagcaatatgtggaagaagaaaaaaga
agaacagatgataagataaatacaggatcatctgttggctttcctgggtttggcagagtg
tcagtccagtccagtttcaccaagaacagcaacatgaggaagatagtcaaacaatcatcg
aataaagatgcgaagttttttagagtttcaagtactgtaaaacttgcacaattcagcatt
gtgagagggaactatattctatcacacaatttccgccgtcgtttacgaaacctcccagaa
cactacgattacttgaaataccttcaagttatcatcgattttgggacccatttctgctct
gccgggacgctgggcggaaaatacgaatacatctaccgatattccaagtctcaacttgaa
aaatccaaactgtccgattcggagcaaagacattgtctgtctatggaagcatcagtcaag
ttctttggttcgggcgtgagtggtggttctacttcatgttcgagcaacgcgttgtctcaa
tctcacggaagcagttttacgaaatcagcggaagacgtgatttcaaatgtcatcggtgga
tattctggcaaagcagcatcgttgtcgttcagcaacgatccgaacgacaacgattacgac
gcgtgggttgaaactgtgaagcataaccccagtatcatagactacgagatcacgccgatg
agcgcagttataactaatccaacaaaaaggcgtaacatggaacgagcgttgtacctctac
atggcaaagtacgatgttgttgcttgcaaaggcaaatgctacaacggagctgcaaaaatt
gtcactgacaatggaaagacatgcacctgtctttgtaaatttccatacactggtgtagat
tgccataatgagtaa
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