Ciona intestinalis (yellow sea squirt): 100183411
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Entry
100183411 CDS
T01056
Name
(RefSeq) alpha-(1,3)-fucosyltransferase 9-like isoform X1
KO
K03663
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase [EC:
2.4.1.152
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00515
Mannose type O-glycan biosynthesis
cin00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cin00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
100183411
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
100183411
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
100183411
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100183411
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.152 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase
100183411
Glycosyltransferases [BR:
cin01003
]
Glycan extension
Lewis blood group
100183411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_10
Glyco_tran_10_N
Motif
Other DBs
NCBI-GeneID:
100183411
NCBI-ProteinID:
XP_018669217
Ensembl:
ENSCING00000013948
LinkDB
All DBs
Position
10:3370276..3379498
Genome browser
AA seq
431 aa
AA seq
DB search
MKRKEEICAYTLKMSALSAIEKKSMKFACIVVFMLIVCCILNLKLKRQWKGFQPRRNKIG
TNKAEEFGIMTLKRAIDIAKLKEKIVLYWCPPDVAAVKSRHRKFCGWCTASSNRSLITDR
RTAAVIFHNNCMSRKEMPPDHLRKPDMYYIWFNMESPLSQSLSKKPLTDFETNYFNATMT
YRRDSAFHQPYMPSNLVLGRVSAFIPKKKRLGIWIVSNCHSHFGAVNRMKYFKELLKSGL
KVDAYGKCFNKLVKLQRGKKEFFQFLGDYKFYFAFENSFHCRDYITEKFMQHGLYSGTIP
IVWGPKKSDVEAIAPPRSFIHVEDFKSAKDLANYISYLDKNNTAYMEYHEWRNHLPRTDP
YSKSSTGLCLLCRTLHGIEEKGKTQMSEYYLRYLNHSFRKVKVRRSLKHRVVQSLNGWWY
GTDNRECLFND
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaagaggaaatctgtgcctataccctgaagatgtccgcattatcagcgata
gaaaaaaagtcaatgaaatttgcttgcattgttgtgtttatgctaattgtctgttgcatc
ttaaacttgaaactgaaacgacaatggaaaggcttccaaccgagacgaaacaaaatcgga
acaaacaaagcggaagagtttggcattatgacattgaaaagagccattgatattgctaag
cttaaagaaaagattgttttatattggtgcccgccagatgtcgctgcagttaaatctaga
cacagaaaattctgcggttggtgcactgcgtcatctaatcgatcactgatcacagatcga
agaactgccgccgtaattttccataacaactgcatgtcaaggaaggaaatgccgcctgat
catttaaggaaacccgatatgtattacatttggtttaacatggaatcgccgttatcgcaa
tcgttgtccaaaaagcctctcacggactttgagacaaactacttcaacgctacaatgacg
tatagaagagattccgcttttcaccaaccgtatatgccaagcaacttagttctcggtaga
gtaagtgcattcattccgaagaagaagagacttggaatttggatagtttcaaattgtcac
agccattttggtgccgtaaatagaatgaaatatttcaaagaacttttaaaatctggactt
aaagttgatgcatatgggaaatgttttaataaacttgtcaaacttcaacgcggtaaaaaa
gaattctttcaatttttgggcgactataaattctacttcgcgttcgagaattctttccat
tgccgggattacataacagaaaagttcatgcagcatggtttgtattcggggacaatacct
attgtttgggggccgaaaaagtccgacgtcgaagcaatagcccctccacggtcgttcatt
catgttgaagattttaaatcagcaaaagatttagcaaactatataagttacctggataag
aacaacacagcgtatatggagtatcatgaatggcgaaatcatctgcctagaactgatcca
tatagtaagtcgtctacgggtctctgtcttctatgccgaactttgcatggaattgaagaa
aaggggaaaacgcaaatgagtgaatattacctacggtatctgaaccactcttttaggaag
gttaaagttcgacgaagtctaaaacaccgggttgttcagagtcttaatggttggtggtat
ggtactgataaccgtgaatgcctttttaacgattaa
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