Ciona intestinalis (yellow sea squirt): 100183417
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Entry
100183417 CDS
T01056
Name
(RefSeq) STIP1 homology and U box-containing protein 1 isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04120
Ubiquitin mediated proteolysis
cin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100183417
04120 Ubiquitin mediated proteolysis
100183417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cin03110
]
100183417
04131 Membrane trafficking [BR:
cin04131
]
100183417
04121 Ubiquitin system [BR:
cin04121
]
100183417
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100183417
Chaperones and folding catalysts [BR:
cin03110
]
Other chaperones and cochaperones
Others
100183417
Membrane trafficking [BR:
cin04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100183417
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
U-box type E3
100183417
Multi subunit type E3
STUB1-CHIC2 complex
100183417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
ANAPC3
Tag1_C
zf-NOSIP
Glyco_hydro_68
DUF3040
Motif
Other DBs
NCBI-GeneID:
100183417
NCBI-ProteinID:
XP_026689714
Ensembl:
ENSCING00000009013
LinkDB
All DBs
Position
3:4971729..4975290
Genome browser
AA seq
287 aa
AA seq
DB search
MVKCLIITVWLLFSISWKETNFMLRRNMKTPSSNTRKPLLNKNSSMSVFYTNRALCNIKL
QKWEEVASDCKAALENDAQSVKAHFFMGQSNLELEKFDDAIVHLSKAHELAMQQKLNFSD
DICFYLRLAKRKKWEKSEKVRIQQEIELQSYLNRLMLEDKQREVEAKTKSVETNKDEQKI
LEEIEEKFESRNQELNSLFAQVDERRKTRDVPDFLCGKISFEIMKDPVITPSGITYDRHL
IEEHIQRVGHFDPVTRHNLELNQLIPNISMREVIANFVEENGWVEEY
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtgtttaattataacagtatggctgctgttcagtataagttggaaggaaaca
aactttatgctcagaagaaatatgaagacgccatcaagcaatacacgaaagccattgtta
aacaagaattcatccatgtctgtattttatacaaatcgagctttgtgtaatatcaagcta
caaaagtgggaggaggtagcctcagattgcaaagcagctcttgaaaatgatgcacaatcg
gtcaaagctcatttctttatgggccaatccaatcttgaattggaaaaatttgacgatgct
atcgttcatttaagcaaagcccatgaacttgcaatgcaacaaaaacttaactttagtgac
gacatttgcttctacttgagattggctaaacggaaaaaatgggagaaatcggaaaaagtt
agaatacagcaagaaattgaattgcagagttacttgaatcgtttaatgcttgaagataag
caacgggaggttgaagctaaaactaaaagtgttgagacaaataaagatgaacagaaaatt
ttagaagaaattgaagaaaaatttgaatcacgtaaccaggagctgaactcattgtttgca
caagttgatgaaagaaggaagactcgtgacgtgcctgatttcttgtgtgggaaaattagt
tttgaaataatgaaggatcccgttataactcccagtggaataacttacgatcgtcatctg
attgaagaacacatacagagggttggacattttgatccagtgactcggcacaatttggaa
ctgaatcaactcataccgaacatttccatgcgtgaagttattgccaactttgttgaagaa
aacggttgggttgaagaatattaa
DBGET
integrated database retrieval system
