Ciona intestinalis (yellow sea squirt): 100183530
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Entry
100183530 CDS
T01056
Name
(RefSeq) F-box only protein 39-like
KO
K10314
F-box protein 39
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100183530
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100183530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
100183530
NCBI-ProteinID:
XP_002122397
Ensembl:
ENSCING00000005348
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSSVADATTVEIVCEETKANTRPQTPVSDTKSWDNLPHVSLIKIFTYLKESQLLELQFVC
KRWYDVIRHTPSLWREKYFRFSGREPRDLTHQPYRYATHFIRTFGKYLHVLEFRLHSPVS
TGVCKKFQVCVKVCLNHLAKSRARIKVLSLPMLQLDRSQWMLYKEDFCSALAKFFCKSQH
SMRDVCLRGARANFDDGYKVLYAMGYNTGDTVTRLDLEDFFGRTPTPVYDKPQFVDCLKN
FTNLQELDLNYSCLSEELLDGLAEKLNPDSLRWFYIKVYAYDPHNQVVWGHSWGALVKKC
PSLKVNMLFQRVMTSDEHFRILLPQIPLSQVSFDGCYFADQSWQLYPTIASILPLFKKHL
RRITIDLPDTREVFENELLTLIQHCDKLVSLKLYAFITSRFVDRLLQMVQDGKSKLEIIK
IRIYLRDYDTQDEESELDRIFAKYERLVGGDLNYYASCVTSI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgtagccgatgcaacgactgtggaaatagtctgcgaagaaacgaaagcgaat
actcgaccccaaactccagtaagcgatacaaaaagctgggataacttgccgcatgtgtcg
ctgatcaaaatcttcacatatctaaaagaatctcagctgttggaacttcagtttgtatgc
aaacgctggtatgatgttatacggcatacgccctcgctttggcgagagaaatattttcgt
ttctcgggccgagaaccacgggacttgacgcaccagccatatagatatgctactcatttt
attagaacgtttggaaaatacctccacgtactagagtttagactacacagtcctgtgagt
acaggggtgtgtaaaaagttccaagtttgcgtcaaagtttgtctaaatcatctagctaag
agtcgggctcggatcaaagtcctgtcattacctatgttacaacttgaccgttctcaatgg
atgctatataaagaagacttttgctctgcattggccaagtttttctgcaaaagtcagcac
agtatgcgcgacgtatgtttgcgtggggcgcgagcaaattttgatgacggttataaagta
ctgtacgctatgggttacaacactggtgacactgtaacccgtctcgatttggaagatttt
ttcggccgtactccgacccccgtttacgataaaccacaatttgtagactgcttaaaaaac
tttacaaaccttcaggaattggacctaaactacagctgtctctctgaagaattattggac
ggcttggccgaaaaactgaaccccgattcgttaagatggttttacataaaagtatacgcg
tatgacccgcataaccaagttgtgtgggggcactcgtggggagctctggtcaaaaagtgt
ccatcattaaaagtgaatatgctgtttcaacgtgtcatgacctctgacgagcactttcgt
attctgctacctcaaataccactgtcacaggtttcgtttgacggatgttatttcgccgat
caatcatggcaactttacccaaccattgcaagcattctacctctgtttaaaaaacatctt
cggcgaattacaatagacttgccggacacaagagaagtctttgaaaacgagttgctaact
ttaatacagcactgtgacaaacttgtctctttgaaactgtatgctttcattacttcaagg
tttgtagatcgtctgctacaaatggtgcaggacggaaagtcgaaattggaaattattaag
attcgtatctacctccgtgactacgacacacaagacgaggaatctgaattagatcgaata
ttcgccaaatatgaaagattggtcggcggcgatctaaattactatgcatcatgtgttacc
tccatttaa
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