KEGG   Ciona intestinalis (yellow sea squirt): 100183530
Entry
100183530         CDS       T01056                                 
Name
(RefSeq) F-box only protein 39-like
  KO
K10314  F-box protein 39
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cin04121]
    100183530
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     100183530
SSDB
Motif
Pfam: F-box-like F-box
Other DBs
NCBI-GeneID: 100183530
NCBI-ProteinID: XP_002122397
Ensembl: ENSCING00000005348
LinkDB
Position
Unknown
AA seq 462 aa
MSSVADATTVEIVCEETKANTRPQTPVSDTKSWDNLPHVSLIKIFTYLKESQLLELQFVC
KRWYDVIRHTPSLWREKYFRFSGREPRDLTHQPYRYATHFIRTFGKYLHVLEFRLHSPVS
TGVCKKFQVCVKVCLNHLAKSRARIKVLSLPMLQLDRSQWMLYKEDFCSALAKFFCKSQH
SMRDVCLRGARANFDDGYKVLYAMGYNTGDTVTRLDLEDFFGRTPTPVYDKPQFVDCLKN
FTNLQELDLNYSCLSEELLDGLAEKLNPDSLRWFYIKVYAYDPHNQVVWGHSWGALVKKC
PSLKVNMLFQRVMTSDEHFRILLPQIPLSQVSFDGCYFADQSWQLYPTIASILPLFKKHL
RRITIDLPDTREVFENELLTLIQHCDKLVSLKLYAFITSRFVDRLLQMVQDGKSKLEIIK
IRIYLRDYDTQDEESELDRIFAKYERLVGGDLNYYASCVTSI
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagttctgtagccgatgcaacgactgtggaaatagtctgcgaagaaacgaaagcgaat
actcgaccccaaactccagtaagcgatacaaaaagctgggataacttgccgcatgtgtcg
ctgatcaaaatcttcacatatctaaaagaatctcagctgttggaacttcagtttgtatgc
aaacgctggtatgatgttatacggcatacgccctcgctttggcgagagaaatattttcgt
ttctcgggccgagaaccacgggacttgacgcaccagccatatagatatgctactcatttt
attagaacgtttggaaaatacctccacgtactagagtttagactacacagtcctgtgagt
acaggggtgtgtaaaaagttccaagtttgcgtcaaagtttgtctaaatcatctagctaag
agtcgggctcggatcaaagtcctgtcattacctatgttacaacttgaccgttctcaatgg
atgctatataaagaagacttttgctctgcattggccaagtttttctgcaaaagtcagcac
agtatgcgcgacgtatgtttgcgtggggcgcgagcaaattttgatgacggttataaagta
ctgtacgctatgggttacaacactggtgacactgtaacccgtctcgatttggaagatttt
ttcggccgtactccgacccccgtttacgataaaccacaatttgtagactgcttaaaaaac
tttacaaaccttcaggaattggacctaaactacagctgtctctctgaagaattattggac
ggcttggccgaaaaactgaaccccgattcgttaagatggttttacataaaagtatacgcg
tatgacccgcataaccaagttgtgtgggggcactcgtggggagctctggtcaaaaagtgt
ccatcattaaaagtgaatatgctgtttcaacgtgtcatgacctctgacgagcactttcgt
attctgctacctcaaataccactgtcacaggtttcgtttgacggatgttatttcgccgat
caatcatggcaactttacccaaccattgcaagcattctacctctgtttaaaaaacatctt
cggcgaattacaatagacttgccggacacaagagaagtctttgaaaacgagttgctaact
ttaatacagcactgtgacaaacttgtctctttgaaactgtatgctttcattacttcaagg
tttgtagatcgtctgctacaaatggtgcaggacggaaagtcgaaattggaaattattaag
attcgtatctacctccgtgactacgacacacaagacgaggaatctgaattagatcgaata
ttcgccaaatatgaaagattggtcggcggcgatctaaattactatgcatcatgtgttacc
tccatttaa

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