KEGG   Ciona intestinalis (yellow sea squirt): 100183534
Entry
100183534         CDS       T01056                                 
Name
(RefSeq) uncharacterized protein LOC100183534
  KO
K26144  little elongation complex subunit 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100183534
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Little elongation complex (LEC)
     100183534
SSDB
Motif
Pfam: NARG2_C
Other DBs
NCBI-GeneID: 100183534
NCBI-ProteinID: XP_009859230
LinkDB
Position
8:complement(681588..694552)
AA seq 1091 aa
MESFEWNPEFQTALSNFQWDSDLAPEEKENVNFGNCGILSQIGCDYASIIMEVMTVEDQV
EKKAPPRNNSILPQPRSSSLTVAQHAHCIRNMEMFLSKVLPPNPTKKQRIIHKDLNALHK
KYMEEKVEFSEYAMQNAMHQIAFYNFVNMQVNNFIQHRIAFSLLSLKTYLQHYVHNSSFM
ISVIPFVNDPQPKFEQLAVSTGSTAPTIKFPKCPVNIPHMNHDEKDHQVWKISEDPNAQK
LALKWQANVVLSLSSLRVLTNNFSPYNEEWEMPMVVKMIQGRKVVFIDKAFISKSLTARE
RNHIYYKHNIKNFLKSNGAVNPQTRTAKEVLVNTKPFVGGEVPDNGEIPVSREKPVLGKT
PDLGETPVIEKAPDLGETPKEKNKRKLEIHSPIKSQSETNEDEAEENNQNFNNSNKPLES
SKLGNLSGSDTTEDLTDSIPLANETESIKSPAAHASIVKIEYVDPEADATKNDIAASPPE
FSDVDSDGCGLTIDDEDYFDLPIPQLDGANDKKKKNPTRNSRRNRKQGVETKEIPKVEKS
QPTKLSFLSAPVNTDVWQNTFSQFQSSSSQKAVVTSSKPTRTSWVQKHSTNTDSEEAMVT
ESSQIKDEDSDDCLVMDTDDEDNSPLSTTTHAGSGLGLTYGMSESPIFGSGIQKVIKESP
AASTILGTCVDTKESTSKIKTRKSKSSVMQKQSKTTIARSGRKSMSQSALETSSSDSENL
EASNSSEDNELFTITSRSKTKKKQSEMTKYTLKNESLVSSTPKTPSTKTAPTSKILKPKP
PVKKKTPEKESSVDLLGQILGMQKERKESIDDKYVHDVPTSAHSQEQRLPPVQFLDKEEL
QTRSDGQVCFYSLWLFGDIRVLIRGTIHGKMSVGQNKSLYESNVVIRSKLEYQPELGYEQ
LTLSDVSTEWIHLMFRPKPTSILRCRIAPSTDKIMCCDVLTDLKDLAPAYNVTGFNEKLA
VKLLNVLFQKLSSTSFNPGTFLICHKAGSREIITRTGMSNLNDRMVLYDLQKEYGNPGRF
VACTVNNIPYVSLDLMKQLPWQEKANHLPGTFDCAGRENGGEKVSPSTKKKKKKAKKAKK
LHDMAVGRIDR
NT seq 3276 nt   +upstreamnt  +downstreamnt
atggaatcgttcgaatggaatccagaattccagacggccctttccaatttccaatgggat
tctgacctagcaccggaagaaaaggaaaacgtgaattttggaaattgtggcattctgtct
cagattggatgcgattatgcgtctatcatcatggaggtcatgactgttgaggatcaagtg
gagaagaaagctcctccaaggaataattccattcttccccaaccacgttcttcatcacta
acagttgcccaacatgcgcactgcattcgaaacatggagatgttccttagtaaagtttta
ccccccaatcccactaaaaaacagcgaattatccacaaggatttaaatgctttgcacaaa
aaatacatggaagaaaaagttgaattcagtgaatatgccatgcagaatgcaatgcatcaa
attgctttttataattttgtgaacatgcaagttaacaactttatacaacatcggattgca
ttcagtttgctttcattgaaaacttaccttcaacattatgttcacaattcatctttcatg
atatctgttattccatttgttaatgatccacaacctaagtttgaacagttggctgtttca
actggttccacagcaccaactataaaattccccaaatgtccggtgaacattcctcacatg
aatcatgatgaaaaagatcatcaagtgtggaagataagtgaagaccccaatgctcaaaag
ttagcattaaagtggcaagccaacgttgtgttatctctcagctcacttcgtgtgcttact
aataactttagtccttataatgaggaatgggagatgccaatggtagttaaaatgattcaa
ggaagaaaagttgtttttattgataaagctttcatttcgaaaagcttaacagctcgtgaa
agaaaccacatatattacaaacataatatcaagaattttctgaaaagtaatggagcagta
aatcctcaaacacgaactgctaaagaagtacttgtcaatacgaaaccttttgttggcggg
gaagtacctgataatggggaaatcccagttagtagggaaaaacctgttcttggaaaaaca
ccggatcttggggaaacacctgttattgaaaaagcaccagatcttggggaaacacctaaa
gaaaaaaataaaagaaaactagagattcattctcctataaaatctcaatctgagactaat
gaagatgaagccgaagaaaataatcaaaatttcaacaacagcaataaaccattagaaagt
tcaaagctgggaaacttgagtggttcggacactacggaagatttaactgattctattcca
ttagcaaatgagacagagtccataaaatcaccagctgcacatgcaagcatagtaaagatt
gaatatgtggacccagaagctgacgctacaaagaatgatatagcagcatctcctccagag
ttttccgacgttgacagtgatggatgcggacttacaatcgatgatgaagattattttgat
cttcccatcccccagcttgatggagcaaatgataagaagaaaaagaatccgaccagaaat
tccaggaggaaccggaagcaaggagtggaaaccaaagaaataccaaaagtcgaaaagtcg
caaccaactaaactgagttttttgtcagcaccagttaacacggatgtgtggcaaaatacc
ttcagtcaattccaatcaagttcatcacagaaagcagttgtcacatccagtaaaccaaca
aggacatcttgggttcaaaaacattcaacaaatacagattctgaagaagcaatggtgaca
gagtcgtctcagatcaaagatgaagactcggatgattgtcttgtgatggacacagatgat
gaagataattctcctctttcaacaacaactcatgctgggagtggactcggcctcacttac
gggatgtcagagtctccaatattcggatcaggaattcaaaaagtcatcaaagaatcgcca
gcagcttctactatcctcggcacatgtgtagacaccaaagaatcaacttctaaaataaaa
actagaaagtcaaaatcttctgtgatgcaaaaacagtccaaaacaactattgccagatct
ggcaggaaaagtatgagtcagtccgcactagaaacctcttccagtgatagtgagaattta
gaagccagcaatagctcagaagataatgaactgtttaccataacttctagaagtaaaacg
aagaagaaacaatctgagatgacaaaatatacactgaaaaatgaatctttagtttcatcc
actcccaaaactccatccacgaagacagctcccacatccaagatcttgaaaccgaaacct
ccagtaaaaaagaagacccctgagaaggaatctagtgtcgatcttcttggacaaatcctt
ggaatgcagaaagaaagaaaggaatcaattgatgataaatatgttcacgatgtaccgaca
tctgcacattcacaagagcaaagattgccaccagttcagtttcttgataaagaagaactt
cagacaagatcagatggacaagtttgtttctacagtttgtggttgtttggtgacatcaga
gttctaattcgtggtacaatacatggaaagatgtctgttgggcagaacaaatccttatat
gagagtaatgttgtgattcgtagcaagttagaatatcaacctgaacttggatatgaacaa
ctcacgctgagtgatgtttcaactgagtggatacatctcatgtttcgtcccaaaccaacc
tcaatattaagatgtcgcattgctccatctactgataagattatgtgttgtgatgttctg
actgatctcaaagacttagcacctgcatacaatgtcacagggttcaatgagaagttggca
gtcaaactgttaaatgttctgttccaaaaactctcctctacaagtttcaaccctggaact
ttccttatttgccacaaagctggatccagagaaatcattacaagaactggaatgtcaaat
ctaaatgacagaatggttctgtacgacttacaaaaggaatatggaaaccctggccgtttt
gtggcttgtacagtgaacaatataccatatgtgtctctcgacctaatgaagcagcttcct
tggcaagagaaagcaaaccatcttcctgggacttttgattgtgcagggcgagagaatggg
ggcgaaaaagtcagtccttctaccaagaaaaaaaagaaaaaggcgaaaaaggcaaagaaa
ttacacgacatggccgtcgggcgaattgatcgctag

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