Ciona intestinalis (yellow sea squirt): 100183541
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Entry
100183541 CDS
T01056
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cin03032
]
100183541
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100183541
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100183541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100183541
NCBI-ProteinID:
XP_002120480
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MPALDIHGIKVEFPFTAYEVQKSYMTKVIQALNTHQNAALESPTGTGKTLCLLCSTLAWR
RQHLNELKKHTNPVSQEDAWSSSEKSKDSAIPAPKIIYASRTHSQISQVVKELKRTDYGK
DITISILGSREQMCIHPEVSKQTSNQAMVHMCRGKINKHTCQFYNNVEDAKKNNIFTTKV
MDIEELVTVGKSRTVCPYYSEREVSKQNECGIIFTPYNYLLDRKSRATNNLEIRGNIVIF
DEAHNLEKLCEESTSFDLTSLEVAKCIEEVGDVLDAATKFEESGTVADGHENGESLSLSE
FKSQDLAIMKSVFIALEKLLDQVELNKDTKSRSEPGKFMFEFLSKINLTESTYQIMLDVV
DKISTYLSTLSNSLRIRGAALQKFSEIVKVAFSWMEDETKGHMTRAQRMQELCMCYRVHI
CENAETGKSTDVWKRSANTSSKPGRTISFWCFSPGYAMTNLVKCGVRNLILTSGTLSPLE
SFTSELQIDFPITLENDHVIDKHQVFVITLTHGKKGGLLNSTFKTRKDVNQVQELGLTVA
DMIAAAPGGALVFFPSYSAMAEYLTIWKENSNVMTLVEKVKPCTVEPKNKHELRTAIDKY
YTDVNTGGGTFLAVCRGKVSEGLDFSDDNGRTVIIVGIPYPPAFDPRIKMKMAFLDDLRT
KGATSLLTGREWYRQQACRAVNQAIGRVIRHRYDYGAIVLCDHRYAGRDQLSELPKWVQP
HVVKFNNAAKCIRRLRSFFCSVNEKEKNRLKEAYEYCEFDNKAETSSCKNLSPKSDIATN
VKTLNSNKRAKVCIKYSESDQHNNYDMYMSPVSISQPTSTKKRKISSTEKSGPAKQKKSL
LDALDNIVSDDEEISDENNSAQNNMPTATTIPDIRKFKQRKKIIVKKKGTEFKTSKENTK
QDSSNNSKQALGFDSTRLTSGPYQYYIECTKSTLSTPLYLEFKKAARDYTKNGDVETVFN
SLHDVFMVVGSQHPELLSSFVRFIRAEHRAQYTKLCSARTKQSSDTPV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgccagctcttgacattcacggtattaaggtggaatttccattcaccgcttacgaggtg
cagaagtcgtacatgacaaaagttattcaagccttaaacacacatcagaatgctgctctt
gaatctccaactggtaccgggaaaacactttgcttgctttgttctacattagcatggagg
aggcaacatttaaatgagttgaagaaacataccaatcctgtatcacaggaggacgcctgg
tcttcatcagaaaagtcaaaggattcagcgattccagctcccaaaataatttatgcttca
agaacacattcacaaatttctcaagttgtaaaagagctgaaacgaacagattatggaaaa
gatataaccatcagcatacttggatcacgggaacagatgtgtatccatcctgaggtttcc
aaacaaacaagcaaccaagccatggtccacatgtgcaggggaaagataaacaaacacact
tgtcagttttataacaatgttgaagatgcaaaaaagaacaacatttttacaactaaagtg
atggatattgaagagctcgtaacagtcggcaaatcaagaactgtttgtccttattactcc
gaacgtgaagtatcaaaacaaaacgagtgtggtattattttcactccatataattatctc
ctggatcgaaaatcacgagccaccaacaatcttgaaattcgagggaatatcgttattttt
gacgaagctcataatcttgaaaagttatgcgaagagtcgacctcatttgacctcacatct
ctggaggttgcgaagtgcatagaagaggttggtgatgtccttgatgctgccacgaaattc
gaagagtcaggaacagttgctgacggtcacgaaaacggagagtctttatctttgagtgaa
tttaaaagtcaagaccttgcaataatgaagtcagtttttatcgcccttgaaaaacttttg
gatcaagttgagttaaataaagataccaagagtcgatcagagccaggaaagttcatgttc
gaatttctctccaaaattaacctcacagaatctacttatcaaataatgcttgatgttgtg
gataaaataagcacctatctgtctactttgagcaactcgcttcgtatacgaggtgctgcc
ttacagaaattctccgaaattgttaaagttgcattttcttggatggaagatgaaacaaaa
ggtcacatgacccgagctcagcgaatgcaagagctatgcatgtgttatcgtgtgcatata
tgtgagaacgctgaaactggaaagtcaactgatgtctggaaaagatctgccaatacttct
tctaaaccaggtcgcacaatatcattctggtgtttcagtcctggttacgcgatgaccaat
ttggtaaaatgtggggttcgaaatcttattttaaccagcgggactttatctccgctggaa
tctttcaccagtgaactacaaatagattttccgatcacgctggaaaatgatcacgttata
gacaaacaccaagtgtttgtgatcacattaactcatgggaaaaagggaggtttattaaat
tcaacattcaagaccagaaaggatgtgaaccaagtgcaagaactcggacttacagttgct
gacatgatcgctgcagcaccagggggcgctcttgtgttctttccttcgtattctgcgatg
gctgaatatttgacaatatggaaagaaaactctaacgtaatgacgcttgtggaaaaagta
aaaccctgcactgttgaacccaagaataaacatgagctaagaactgcaattgacaaatat
tatacagacgtcaacactgggggaggaacttttcttgctgtttgtcgaggcaaagtttca
gaaggacttgatttttctgacgataacggacgaacagtgatcatcgttggaatcccgtat
cctcctgcttttgatccgagaattaagatgaagatggctttcctggatgacctcaggacc
aaaggagcaacaagtttactgactggtagggaatggtacagacaacaagcttgcagagct
gtcaatcaagctattggaagagtcattcgacatagatatgattatggggcaattgtttta
tgcgatcatagatacgcaggcagagatcaactaagtgagcttccaaagtgggttcaacct
cacgtagttaaattcaacaacgcagctaaatgcatcagaagacttcgttctttcttttgc
tccgtcaacgaaaaggaaaaaaatcgtttaaaggaagcttatgaatattgtgagtttgac
aacaaagccgaaacttcttcatgtaaaaatctttccccaaaatctgatatcgcaacaaat
gtaaaaactttaaattcaaataaaagagccaaggtgtgcatcaagtacagtgaaagtgac
caacacaataattatgacatgtatatgtcccctgtttcaatttctcagcctacctcaacg
aaaaaaaggaaaatttcctccacagaaaaaagtggccctgccaaacagaagaaaagtttg
cttgatgctttggataatattgtgagcgatgatgaagaaatttcggatgaaaataattct
gcccaaaataatatgcccactgccactacaatacctgacataaggaaatttaaacaaagg
aaaaagatcattgtaaagaaaaaaggaacagagtttaaaacgtcaaaagaaaatacaaaa
caagattcttcgaacaactcaaaacaagcattaggttttgatagcacacgtttgacaagc
gggccataccagtattacattgaatgcaccaaatcaacactaagcactccattatatctt
gagtttaaaaaagctgcacgagattatacaaagaatggtgacgttgaaacggtgtttaat
tccctgcacgatgtattcatggtggttggctcgcagcacccagagttgttaagcagcttc
gttcgcttcatacgagccgaacatcgggcccaatacaccaagctatgttcagcgcggaca
aaacaaagctcagatacaccggtgtaa
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