Ciona intestinalis (yellow sea squirt): 100183543
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Entry
100183543 CDS
T01056
Name
(RefSeq) UDP-glucose 4-epimerase isoform X1
KO
K01784
UDP-glucose 4-epimerase [EC:
5.1.3.2
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00052
Galactose metabolism
cin00520
Amino sugar and nucleotide sugar metabolism
cin01100
Metabolic pathways
cin01250
Biosynthesis of nucleotide sugars
Module
cin_M00632
Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
cin_M01004
UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
100183543
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
100183543
Enzymes [BR:
cin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.2 UDP-glucose 4-epimerase
100183543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NmrA
RmlD_sub_bind
adh_short
KR
NAD_binding_10
NAD_binding_4
Isochorismatase
LpxI_N
DUF7248
Motif
Other DBs
NCBI-GeneID:
100183543
NCBI-ProteinID:
XP_002128417
Ensembl:
ENSCING00000007115
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MEYPNSRQRNVTNFVDEKLDACNKTPKYGRTAKRGSFQKTQMPSSNEKYVLVTGGAGYIG
SHTVVELIQEGYTPVVADNCCNATKGKDQRLPESIKRIKQITGKDVLFYEYDLLDKEKLE
SLFQKYKFFAAIHFAGLKSVTESIQKPMEYYDVNLGATINLIECMKEYGVTRVVFSSSAT
VYGPPQKLPVDENHQVGKGLTNPYGKTKFFIEEIFRDLAKAETGWHIALLRYFNPVGSHI
TGLIGEDPQGIPNNLMPYVSQVAIGRLPYLNVYGNDYETHDGTGVRDFIHVVDLAKGHIA
ALNKMDQTDGCQAFNLGTGTGYSVLEAVAAFEKASGKKVPYKFAPRRPGDLGNVHANPNL
ALKFLEWRADKTLEDMCVDLWRWQSMNPKGYEITPDPQ
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcctaactcccgacaacggaacgtcacaaattttgtagatgagaaattagac
gcttgtaataagactccaaaatatggcagaacagcaaaacgtggctctttccaaaagacc
caaatgccttcttctaatgaaaagtatgtactggttactggtggagctggttatataggc
agccatacagttgtagagctgatacaagaaggctatacacctgttgtggctgataactgc
tgcaatgctacaaaaggaaaagaccagcggttgccagagagcatcaaacgcattaagcaa
attactggcaaagacgttttgttttacgagtacgatttactggataaagaaaaacttgag
agccttttccaaaagtacaagttttttgccgctattcattttgctggcctaaaatcggtg
actgaatcaattcaaaaaccaatggagtattatgatgtcaacttgggggccaccatcaac
ctgatagagtgcatgaaggaatacggagtcaccagggtcgtcttcagcagctccgctact
gtatatgggcccccacaaaaactcccagttgacgaaaaccatcaagttggaaaaggtctc
acaaacccgtacgggaaaacgaaatttttcattgaagaaattttccgggatttggcaaaa
gcagaaacggggtggcatattgctttgttgcgatattttaacccagtggggtcccacatc
acggggttaataggggaagacccacaaggaataccgaataacttaatgccatatgtttca
caggtggctataggacgccttccgtaccttaacgtttacggcaacgattacgaaacacac
gatggcactggtgtgcgagatttcattcacgttgttgacttggctaaaggccacattgct
gcgctgaataaaatggaccaaactgatggatgccaggcttttaaccttggcacaggaact
ggttattctgtgcttgaagctgttgcagcttttgaaaaagcttctggcaaaaaagttcca
tataagtttgcacctaggcgaccaggagaccttggcaacgtgcatgccaaccctaaccta
gctttgaaatttctggaatggagagcagacaaaacactcgaagacatgtgcgttgattta
tggcgttggcagtccatgaacccaaaaggctacgaaattacacctgacccacagtga
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