Ciona intestinalis (yellow sea squirt): 100183623
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Entry
100183623 CDS
T01056
Name
(RefSeq) alpha-amylase 2-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00500
Starch and sucrose metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100183623
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
100183623
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Gene cluster
GFIT
Motif
Pfam:
Trefoil
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
100183623
NCBI-ProteinID:
XP_002120963
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All DBs
Position
5:742381..747657
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AA seq
611 aa
AA seq
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MKTVLLIFSLVAAASAQWDPNFVSGRAGIVHLFEWHWDTIADECETFLAPNLYAGVQVSP
PNENRIVGGRPWWERYQPVSYKIGTRSGDRAAFENMVDRCNSVGVRIYVDAVVNHMCGGD
GGSSTQGTAGSTCYPDSEGFPAVPYSSLDFNDGNCNTASGDIENYGDAAQVRNCKLVGLL
DLNQGTDYVRGRIIEFMNDMLSLGVAGFRVDACKHMWPGDLEVIFGSLNDLSTAKGFSGG
SRPYIYQEVIDQGGEPITADQYFSCGAVTEFKYGVNLGNNKNSIQYLENFGESWGMMPGG
NALVFLNNHDNQRGHGGGGNIITFEDPFNLKIFTAYMMAWPYGVPRVMSSYYFSNSDEGP
PSNQRSINADGSCGNGWVCEHRWRQIKNMMGFAVAAQGQGVSNWWSNGQQIAFSRGDRAF
LAINHDGYTLSENLQTGMPAGDYCNVNSGEYSNNQCTGECISVGSDGYAYINIGATEDPV
VAIHVNAPCNCEGGNCGGNTGGGGGTTNPPITGECTSCSNCNSKVDCGYLGIDQTQCEGS
GCLWCPSSGNDPWCIVSTGSSGGTGGSSCSISDLSKQDCGYVGIDEGSCEGKGCCWVESS
TNGIPWCFYPQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggtgttgcttatcttttcgttggttgccgctgcttcagcgcagtgggatcca
aactttgtttcaggaagagctggaatcgtccatctatttgaatggcactgggacaccatt
gctgatgaatgcgaaacttttcttgctcccaacttatacgcaggtgttcaggtttctccc
ccaaatgagaaccgcattgttggtggaagaccttggtgggaaagatatcaacccgtctct
tacaagatcggaaccagatccggagacagggcggcattcgaaaacatggtggatagatgc
aacagcgttggtgtaagaatatacgtggatgcggtggtgaaccatatgtgtggcggggat
ggtggatcaagcacccaaggaactgctggcagcacctgctaccctgactcagaaggtttt
ccggccgtcccgtattctagtttagatttcaacgatggtaactgcaatacagcgtccggg
gacattgagaactacggcgatgccgctcaggtgaggaactgtaaactggtaggcctgctt
gatctcaaccaagggacggattacgtcagaggtagaataattgaattcatgaacgacatg
ctcagcctcggtgtcgctggttttcgtgttgatgcatgcaagcacatgtggcctggagat
ctggaagtaatttttggatccctcaacgacctttcaacggccaagggatttagtggagga
agtcgaccctacatttatcaagaagttattgaccaaggaggtgagcctattacggccgac
cagtatttcagctgtggggccgtaacagaattcaaatatggagtcaatcttggcaataac
aaaaactcaattcagtatttagagaatttcggagaatcttggggaatgatgcctggtgga
aacgctttggttttcttgaacaaccacgacaaccaacgtggacatggtggtggggggaac
atcatcacgtttgaagacccgtttaatttgaaaatattcacggcttacatgatggcttgg
ccttacggagtccctcgagtaatgtcaagttattatttcagcaattctgatgaaggtcca
ccatcaaaccagcgaagcatcaacgcggatggttcttgtggaaacggttgggtttgcgaa
catcgttggcgtcagattaaaaacatgatgggcttcgctgttgcggcgcaaggccagggt
gtttcaaactggtggtcaaatggtcaacaaattgcattttctcgtggagatcgagctttt
ttggcaattaatcatgacggttatacattgagtgaaaacctgcaaactgggatgcctgct
ggtgattactgcaacgttaactctggtgaatattccaacaaccaatgtactggcgaatgt
atttctgttggatccgacgggtacgcgtatattaacatcggtgcaactgaagacccagtt
gttgccattcacgtcaatgctccttgcaactgtgaaggtggaaactgtggtggaaacacc
gggggtgggggtggaacaaccaaccctccaatcacgggtgaatgcacgagttgtagcaat
tgcaatagcaaagtagattgtggatacctcggtatcgatcaaacacaatgtgaaggcagt
ggctgcctgtggtgtccatcatctggtaacgatccatggtgtattgtctcaactggttct
tctggtggaacgggcggatcatcgtgcagcatctcggatttatccaaacaagattgtgga
tatgtaggaattgacgagggtagctgtgaaggcaaaggctgttgttgggttgaatcgtca
acaaatgggataccgtggtgtttctacccgcagtaa
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