Ciona intestinalis (yellow sea squirt): 100183654
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Entry
100183654 CDS
T01056
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100183654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100183654
03032 DNA replication proteins [BR:
cin03032
]
100183654
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
100183654
Prokaryotic type
100183654
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
100183654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
Pus10_C
Barttin
UPF0113
PUA_elF2D
Motif
Other DBs
NCBI-GeneID:
100183654
NCBI-ProteinID:
XP_004225516
LinkDB
All DBs
Position
1:complement(3998446..4004143)
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AA seq
586 aa
AA seq
DB search
MGRVIRTYSIHFVHVVEGVTPRPCFYELCTCFALIISLLAPLVNADCFVIEIMENGKDST
KKKKKAKNVNVAEAQRSGDFLIEPEDKPPPKLNTSDWPLLLKNHNQLNIRTNHYTPLPFG
CSPLKRNIHEYVRTGFINLDKPANPSSHEVVAWLRRILKVEKTGHSGTLDPKVTGCLIVC
VERATRLVKSQQSAGKEYVCIVRLHGVIENQLKLARAIETLTGALFQRPPLISAVKRQLR
VRTIYQSKLLEYDMDKRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGIMS
ENDDLVTMHDVLDAQYQLDHHKDETHLRRVISPLEKLLVSHKRIILKDSAVNAICYGAKI
LLPGVLRYEDGIEVNQEIVIITTKGEAICLAIALMTTAVISTCDHGIVAKIKRVIMERDT
YPRKWGLGPKASLKKSMIKKGLLGKYGKPNEKTPKDYLEGNPDFSLTDVGTIVKTPEAAE
DISTAGVKRKRNSSDSSSESAPQAKIEVIETPVTVKKTKDGKEKKKDKKEKKEKKKAKKS
KGDESLDASVLDKTAETTDGELKSPEKKKKKKDKSEKDKKKKKTSE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagtcattaggacgtatagcatacatttcgtccacgtggttgaaggtgtgacc
ccgcgaccctgcttttacgagttatgcacgtgttttgctttaatcatttcgctgcttgct
ccgctggtgaatgccgattgttttgtaatagaaataatggagaatggaaaagactctacc
aaaaagaaaaagaaggcgaagaatgttaatgttgcggaagctcaacgaagtggagatttt
ttgattgaacctgaagataaaccaccaccaaagcttaacacatcagattggccactttta
ttaaaaaatcacaatcaactgaatatccgaacaaatcattacactccgcttccttttggt
tgttcacctttaaaacgaaatattcatgaatatgtgagaactggatttataaatctcgat
aaaccggccaacccatcctcacatgaagttgttgcttggttgagaagaatcctgaaggta
gagaagacggggcatagtggaacacttgatccaaaagtaactggatgtctcattgtgtgt
gtggaacgagcaacacgactcgtcaaatctcagcagtctgctggtaaagaatatgtctgc
attgtaagattacatggtgttattgaaaatcagcttaagctggcaagggcaattgaaacc
cttacaggagctttgtttcaacgaccacctttaatatctgctgtcaaacgacaacttcgt
gtgagaacaatctatcagagcaaactattagagtatgatatggacaaaagacttggcgtt
ttctgggtaagttgtgaagccggcacttacattcgaactctgtgtgttcatcttggttta
ttgctcggagttggaggtcagatgcaagagttacgaagagttcgatcaggaattatgtca
gaaaatgatgatcttgtcacgatgcatgatgtgctggatgctcaatatcagcttgatcat
cataaagatgaaactcatcttcgaagggttatcagtccattagaaaagttgcttgtttca
cataaaagaattattttaaaagacagtgctgtaaatgcaatttgttatggtgcaaagata
ttgttacctggcgttttgaggtatgaagatggaattgaagtaaaccaggaaattgtgata
atcacaacaaaaggagaagcaatttgtcttgcaattgcacttatgaccactgccgtgata
tcaacctgcgatcacgggattgttgccaaaatcaaacgcgtcatcatggaacgggacact
taccccagaaaatggggtttagggcctaaggcatctttaaagaagagcatgatcaaaaaa
ggtttgctgggaaaatatggaaaaccaaacgaaaaaacaccaaaagattatttagaaggc
aaccctgattttagcttaacagatgttggtacaatcgttaaaacaccagaagctgctgaa
gacatttccaccgcaggagttaagagaaaacgcaattccagtgacagttcttctgaatcc
gcacctcaagctaaaattgaagtaattgaaaccccagttactgtaaaaaagactaaagat
ggtaaagaaaaaaagaaagataaaaaagaaaagaaggaaaaaaagaaagcgaagaaatct
aaaggagatgaatcccttgatgcatctgttttagataaaactgctgaaacaacagatggt
gaacttaagtctccggagaagaagaagaaaaagaaagataaatctgaaaaggataaaaag
aagaaaaaaactagtgaatga
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