Ciona intestinalis (yellow sea squirt): 100183676
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Entry
100183676 CDS
T01056
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100183676
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100183676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Zn_ribbon_3
zf-C2H2_12
Zn_ribbon_tTFIIB
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
100183676
NCBI-ProteinID:
XP_002130866
Ensembl:
ENSCING00000004176
ENSCING00000004184
LinkDB
All DBs
Position
4:1772921..1785509
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AA seq
657 aa
AA seq
DB search
MTKTCPNCKSSEFDVDPARGDTVCMNCGSVLEENRIVSEISIQENADGSSSVVGQFVTTE
GSYNPHLSGFQYGIGKESRQITLDKGKNQIRDMAAQLNLNRHCVDTAFNFFKMAISKRLS
RGRRITHIVAACLYMTCRTEGTPHLLLDFSDITQVNVFILGKVFLLLAKELHINLPVLDP
CMYITRFAHRLDFNEKTHEVSVAAMRLVSRMKRDWIHTGRRPSGLCGAALLVAARLHGFN
CDLNDVVKVARIGHDTIRKRLNEFESTPSSKLTINEFMKIDLEAEHDPPAFINSRIKAKI
HQLEAEGASLENEIGKLSNVIDDKLTQQSSRPASPANVSKPSNSSVNRVPEHVSNDDDPE
LRAAATFMHSEHPEAVAQSLLSPKRGLPQPTRQGFRSTGPTPTAASLGLRTSIDECLSTP
SDSDRLHENDNNNGELDLTGIDDNEIDKLLLSPHESEIKQRIWMKEYGEFVKELEEKREI
KRIENEKKNRRPRKFKQVRYKEYYGESRTAGEAIEKLVSRQRLSNKINYEALKKATEDCS
KPESPKPDVIVSPEAIIETGDVRPVSKRCATEGKTGSRKKAKREVACTGIGVDDVVKQDV
IVEETKPVLLAPEEEEEEYEEEEEEGAHCMSASQMMQEAGLAGGGYGNYGGTGYDYD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaacttgtccaaattgcaaatcaagcgagttcgatgtcgatccagcaagggga
gatacagtttgtatgaactgtggttcagtattggaagaaaatagaattgtttctgaaatc
tcaattcaagagaatgctgatggatcttcatctgttgttggtcaatttgttactactgaa
ggcagctacaatccacatctttctggcttccaatatggtattggaaaagaatctcgacaa
attacattggataaaggcaaaaaccagatacgtgatatggccgcgcaacttaatctcaat
cgacattgtgttgatactgcattcaactttttcaaaatggcaatcagtaaacgcttatca
aggggaagacgtattactcatattgttgcagcatgtttatacatgacatgcagaacagaa
ggaacacctcacttgctcctggatttcagcgacataactcaggtgaatgtcttcattttg
ggaaaagtttttctacttctagcaaaggaactgcacattaatcttccagtcttggatccg
tgcatgtacatcactcgtttcgcccatcgacttgatttcaacgaaaaaacccacgaagtt
tctgtggccgccatgcgactcgtatcccgtatgaaacgtgactggatccacactggcaga
cgaccatcaggcctttgtggtgctgcactgctggtagcagcacgactgcatggttttaac
tgcgaccttaacgacgtggtaaaagtggcaaggataggacatgacactatacgcaaaagg
ttaaacgaattcgaatccaccccctcatccaagctcaccatcaacgagttcatgaagatc
gacctggaagcggagcatgatcctcctgcgttcattaactcccggatcaaagcaaagatt
catcaactggaggcggaaggagcatccttagaaaatgaaatcgggaagctatccaacgtt
atagacgacaaactcacgcaacaaagcagcagaccagcttccccagccaatgtatcgaaa
ccgtcgaactcgtctgtaaacagagtacccgaacatgtgagtaacgacgacgaccctgaa
ttaagagcagcggccacgttcatgcactctgagcaccctgaagccgtcgcccaatccctt
ctatcgccaaagagaggtttaccccaacctacaagacaagggtttcgaagtacaggaccc
acgccgaccgcagccagcttaggtttacgtacaagtatcgatgagtgtctctctacacct
tccgacagcgaccgtctgcacgaaaacgataataacaacggagaactggatttaaccgga
atagatgacaatgagatagacaaactgcttctttcgccacatgaaagtgaaataaaacag
agaatttggatgaaagaatatggggaatttgtaaaggagttagaggagaaaagagaaata
aagagaatagaaaatgaaaaaaagaatcgacgacccagaaaattcaagcaagttcgttac
aaggaatattacggtgaaagtagaactgctggagaagcgatcgaaaaactcgtctcccgg
caacgcttgtctaataaaatcaactatgaagcactaaaaaaggcaactgaagactgtagc
aaacctgaatcacctaaacccgacgtaatcgtttctcccgaagccataattgaaaccggt
gacgtacgtccagtatcgaagcgttgtgctactgaaggaaagactgggtcaaggaaaaaa
gcaaaacgggaagttgcttgtaccggtattggtgttgacgatgtagtaaaacaggatgtt
attgtggaagaaacgaaacccgtgctccttgctcctgaggaagaggaagaagagtatgag
gaggaggaagaggaaggagctcattgtatgagcgcctcccaaatgatgcaggaagcaggt
ttagcaggcggagggtatggcaactatggcggtacaggttacgactacgattaa
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