Ciona intestinalis (yellow sea squirt): 100183677
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Entry
100183677 CDS
T01056
Name
(RefSeq) ribosomal RNA-processing protein 7 homolog A-like
KO
K14545
ribosomal RNA-processing protein 7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100183677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100183677
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100183677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP7
RRM_1
ATG14
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
100183677
NCBI-ProteinID:
XP_002121115
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All DBs
Position
13:1492368..1496861
Genome browser
AA seq
259 aa
AA seq
DB search
MENQDNKVYQIKIKAQASCSSCHTLFITNKSKPNVHVLLVSSIPPYCNQHTLHRLFGKCG
KILEVRLQKHANKPINDDQTTDNFPPPPILGFKVAFITFQSNKGINEFIKKTKSTEPWLI
SNESTKLITGLKKWCLDYIYEQPDPKKLKLEVDEYMTKYDAKVKQEQEEEIENDGIPDDE
GWVKVSSRGRNAGVSRTETNQKKSKRKEKKKRKQNEMFSIYKYQVRESKRQKIAELREKF
EEDKLRIQAMKEARKFRPF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcaagacaataaagtttaccagattaaaataaaagcccaagcctcatgttcc
agttgtcacacgttgtttattactaacaaatcaaagccgaacgtacacgttttacttgtg
tccagcattcccccatattgtaaccagcacacgttacatcgcttgttcggaaaatgcggc
aaaattcttgaagttcgacttcaaaaacacgcaaacaaaccaataaacgatgatcaaacg
actgacaacttccctccaccaccaatactggggtttaaagtagctttcataacctttcag
tcgaacaagggaatcaatgaattcataaagaaaacaaaatcaacagaaccttggttgatt
tcaaatgaatcgaccaaacttataactggattaaaaaaatggtgtttggattacatttat
gaacaaccagatcctaagaaacttaaactagaagtggatgaatatatgaccaagtatgat
gccaaagttaaacaggagcaagaggaagaaattgaaaacgatggaattccggacgatgaa
ggttgggttaaagtgtccagtagagggcgaaatgcgggagtgagtagaacggaaacgaat
caaaaaaagtccaagagaaaagaaaagaaaaagcgaaaacaaaacgaaatgtttagtatt
tataaataccaggtccgggaatcaaaaagacaaaaaatcgcggaacttcgtgaaaagttt
gaagaagacaagttgagaatacaggccatgaaagaagccagaaagttccggccgttttaa
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