KEGG   Ciona intestinalis (yellow sea squirt): 100183682
Entry
100183682         CDS       T01056                                 
Name
(RefSeq) RNA-binding protein 28
  KO
K14573  nucleolar protein 4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100183682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cin03009]
    100183682
Ribosome biogenesis [BR:cin03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    100183682
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded RNA_pol_3_Rpc31
Other DBs
NCBI-GeneID: 100183682
NCBI-ProteinID: XP_002130575
Ensembl: ENSCING00000009238
LinkDB
Position
5:complement(4900806..4905274)
AA seq 825 aa
MQTFTVMNDTLSHKTVFVKGIPASCSNDQLKETFSVHGPIKEAFVVKTKSEHESKKCIGF
VTYQTNDDAKSAVNASPSTLEVDGHKLNVIFAKKKKFSKGNKNKRKAAVSNEEAGFDIVP
LECDNSDKTVEKVEEVATSNKFIVAIEGLKSINDISSLWKKKSLGEINSADVKKENETVL
VSFPNKQKALKATARINNTYFNDVVIHAALQVDTDSKEFRKSSKKSRLIIRNLSFFCTED
ELKSEFKRFGKITEVKIPVKPDGKKRGFAFVQFSHVLEAGKAIKEVNMSEIKGRKVAVDW
ALPREKYQEITKSDTKDEEVPKQEETTDLSEKASIEDDSQKEEEEEEKEQEEESEMEEDE
SEVEDEEEDEGSSEDESMDEEKQEEGAVKDKEADKKSKPQKRTESSDVHEGKTVFIRNLS
YESEEAELKIVMEKFGDINYCKIVINKATGLPKGSAFVQFATKEEAEKCIEAPQISLDGR
DLFVTLATTRAESTKLVKVKKEEGREKEDKRNLYLANEGLIRPGTQAAEGLSEIELNKRQ
RIENAKRLKLKNSNIFVSTTRLCVHNLPRAVDDAKLKELVNKVFENENRKPKIIECRVMR
DREKKTSNGVGRSLGFAFVALTKHEDSLKALRSLNNNPEIFGALKRPIVEFSLENRLAIE
AQMQKRKRQLTRNELKGAVENTAPKKKRKWDVPKPKVEKSKVTPSPILSKVDRKPFQGST
GTTLSGKKLKMPKHSGLKIRKRNKGNVLAQIKESKKLNRPPSVRNAQANKKQARAARPEP
QQPKEKRQRRSGKSKDVQMENDFNKLVAKYTSKFSSKLKGKWHES
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgcagacgtttacagtcatgaatgacactcttagccataaaacagtttttgtaaaaggt
attcctgcttcgtgttcaaatgaccaattaaaagagactttcagtgtacatggcccaatt
aaagaagcatttgttgttaagacaaaatctgagcatgaaagcaaaaaatgtattggtttc
gttacttaccaaaccaatgatgacgcaaaatcagcagttaacgcttcaccgagtacactg
gaagtggacggtcacaaactaaacgtgatttttgcaaagaaaaagaaattttccaaaggg
aataagaacaaacgtaaagcagcagtgagtaatgaagaggctgggtttgatatcgtgccg
ttggaatgtgacaattctgataaaactgtcgaaaaagttgaagaagtagcaaccagtaat
aaatttattgttgctattgaaggactaaagtctattaatgatataagttctttatggaag
aaaaaatccttgggtgaaattaactcagctgatgtcaaaaaagaaaatgaaacagttctc
gtctcatttccaaacaagcaaaaagctttaaaagcgacagctaggataaataacacctat
tttaatgatgtcgtaattcatgctgccttgcaagttgatacagattcaaaggagtttcga
aaatcatctaaaaaatctcggttaatcatcaggaacctaagtttcttctgtacggaagat
gagttgaaatctgagtttaaaaggtttggaaaaatcactgaagtaaaaatcccagtaaaa
ccagatgggaaaaaacgtgggtttgcatttgtgcaattctcacatgtattggaagcgggt
aaagcaataaaagaagtgaatatgagtgaaattaagggcagaaaagtagcagtagattgg
gctttgccgagggaaaaataccaagaaataacgaagtcagatacaaaagatgaagaagta
ccaaagcaagaagaaactacagatttatctgaaaaagcatcaattgaagatgattctcaa
aaagaagaggaagaagaagagaaggagcaagaggaggagagtgagatggaggaagatgaa
agtgaggtggaggatgaggaggaagatgaaggatcatctgaagatgaatcaatggacgaa
gagaaacaagaagagggagcagtaaaagacaaagaagctgataaaaaatctaagccacaa
aaacgaacagaatcctctgatgtccatgaaggaaaaactgtttttatccgaaacttgtcg
tatgaatctgaagaggcagaactgaaaattgtgatggagaagtttggggatataaattac
tgtaaaatcgttataaataaagcaacaggccttccaaagggttcagcttttgttcaattc
gcaacaaaagaagaagctgaaaaatgtatcgaggcaccacagatttctctagatgggaga
gatctattcgtcaccctagcaacaacccgtgcagagtcaaccaagcttgtaaaagtaaaa
aaagaggagggaagagaaaaggaagataaaaggaatttgtatcttgcaaatgaaggctta
ataagaccaggaacccaagcagcagaaggtctcagtgagatagagctgaacaaaagacaa
cgcattgaaaatgccaagaggctcaaactaaaaaattccaatatatttgtctctacaact
cgactgtgcgttcataacctaccaagggcagttgatgacgcaaagttaaaggaattggta
aataaggtattcgaaaatgaaaacagaaaaccaaagattattgagtgcagagtgatgagg
gatcgggaaaaaaagaccagcaatggcgttgggcgttcattgggttttgcattcgttgca
ttaacaaaacatgaagactcattgaaagcacttcgttcacttaacaataacccagaaatt
ttcggggcattaaagagaccaattgttgagttttcactcgaaaatcgtctcgcaattgag
gctcaaatgcagaaaagaaagcggcaattgacaagaaatgagctaaaaggagctgttgag
aacacagcacctaaaaagaagagaaaatgggatgttccaaaacccaaagtagagaagagt
aaagtcacaccttctccaattctgagtaaagtagaccgaaaaccgtttcagggaagtaca
gggaccacattaagcgggaaaaagctgaaaatgccaaagcattctggcctaaaaattcga
aaacggaacaagggcaatgttctggcacagattaaagagagcaagaaattgaatcggcca
ccatctgtaagaaatgcccaagcaaataagaagcaagcacgtgctgcaagacctgaacca
caacaaccgaaagaaaaaaggcaaagaagaagtggcaagagtaaagacgtccaaatggaa
aatgatttcaacaaattagttgctaagtacacttcaaaattcagttcaaaattgaagggc
aaatggcatgaaagttaa

DBGET integrated database retrieval system