Ciona intestinalis (yellow sea squirt): 100183692
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Entry
100183692 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100183692
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100183692
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100183692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
DUF6011
Motif
Other DBs
NCBI-GeneID:
100183692
NCBI-ProteinID:
XP_002121633
LinkDB
All DBs
Position
4:853286..868858
Genome browser
AA seq
1975 aa
AA seq
DB search
MVERSALSNGQSMITVKQPLIDVRAWFASSRGPGVFGHGNVTTSMRVPHFDIDQFALKAN
VSAGFNGQCQRRSHYDNTLVQETTALHRRPEVILNSNCRQAATYGPDSSLTEKSTPAPLY
KMYYSDPYRAGGGRQNGIIDSGRCGVFSEADNVVTQNTNGLRAGGCPVSLDTRPRDNTIV
AEVQTVTSKGNISTKILTTSHILPPNLHGVNESFDHNGERTQVPGMDHFDGLPIWNKAQR
NDDSVTVKQPADLSAIEQVGNAELRKKSMFEQTFTSAFTSAEPNRSQASHTTIAVAQSSQ
VVDHNVETKSGDIVVKQILTSADGSLSHVRRTKGRNSINDINSAEFYSSCPKSDATDQVT
VIEVTAKECFSNSVCVAEVRRSSSLCRRATTTETQQVLPTNCLHHSQVKTTVVSDQISHE
ILLNGTNLRGSSQYRVSYSNDFNKPVTSPGITQDYLRPPRCQSSINLQENVDKTTSFRTK
RNSFLCSSQANILKLKLRNSVRNPASEHDPSYRKRLCKSLTNITADDLLSAPCASIYDSN
LDNSQESKSSQSDLLASRMRTNRTELLPEDLQKPNNINFTVGDLNAVNSKKEVPPSQSNS
TKKLKHEGKRRVDDEMSQSVPTRLQNDGVKLTSDNKSKLLSSRKTPKLSKTLFPFMRKNR
KRQNNMAENATGKPMKAKGTINNKNASDSATNKISKKDNGNNISAEPSKSHLTNTNTSFP
QKDGMGSVGFRKLKITSQQNDRNVHADYATRVTRVRRRSSNDSEDKRSREESEGNRKPYE
KVILREKPRPRRQTSRRSTEDISKSATSTDDVLLLRHSLNDPELFLQSDPTSSQGNFTFE
KVHDSVQSDGFKLRNHSVAQTEGLDQQTHQQVINRCSLNIDYLRSSNYLDRMSFIRSIPG
PETTLNGSICGSMTGISTPCSSILTIGIGTAARCSLASSYASVFEDDRNISDVRNVSCEI
GDPEARADSFVKPDPPKQLRRAKSLYNPPNLQLRQFNRRSVSPTLQDDLFESMKLKTSNP
ENFRTTARPPQPNKPTTPKPRKMSASGSCSSLNMFNFRLSQQNICNTNEPVAICRPASYQ
YNQEIVADSGEPRSKISAKNSSIRRRMSLQLLKPTNRDMKAIPIVSQLNDEYKRHSIAGL
DAEKVKTAMTRWSAISNNMSSSNRSSRRRIRPLSEVQNFRWDVQAIPEHNEITSPCNEEI
ISKLPSTLPRPKTKPDSATPTSGNGCVRKVPPKTKKVSISEVNSTYEANDFEILPRLSFI
GSSFSQEELSSRTPFDQEILVETCHLRKALSVIGGINTMPDSLLHFYPTKYYNEIGNRTF
HSYYGVRGQQVHDERCRIQGSMSGISTESGYGTMTRNGTRLRTPDNEEDAVFVNSNSNQL
GGGTSAQQTNGVFVEALWDHVTMDPDELGFKVGDVIRVNDMSNADWWWGELDSVEGWFPA
TFVRILVNQQIRTDSNNSDIIVSSYASSQSEDEISVTSHEFSRVTSFNDICQCTEQRSTT
SIHCNVCGRPLTDATPASRASIANQTKQPEIVITKPPSNARKASITRDQIRANVIKEIVN
SEKVFVGHLKDVVQGYLTRCRNRSDMFTDEELNTLFGNIEDIYLFQRDFAAELEASVDSS
SVHTTELGNVFLKHKDGFCIYSEYCNNHPQALAELAHLLTFKKYVHFFEACRLLQKMIDI
PLDGFLLTPVQKICKYPLQLAELLKYTHPEHQDYDAVKSALEAMKGVAHMINERKRKMEN
VRKISQWQASIVNWQGESVLSRSSELVHSGEVYALSQVKSKPKSRVAFLFDHQMILCKKD
LLRRDLLYYKARIDLDAVEVSATEPDSPKSSHSGNDWHSSSSLGSCQGWKVTDTTTGESG
LMYCKNPDDCGKWMKAFALERKIAETKASGTPLPTEAYSLSVLQNSLTVSRKPKEASTQR
LAPSYRYRIKMAQEVQELSAKQTNYGSEKSGFFSSVAGKLTPFRRTHTRESSFVF
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaacgttccgcattgagcaatggccagtcaatgattactgtcaagcaaccattg
atagatgtacgtgcttggttcgctagctcccgaggccctggtgtattcggccacggtaat
gtgaccaccagcatgagagtccctcacttcgatatcgatcaatttgcactcaaagctaac
gtaagtgcaggatttaatggacaatgtcagcgcaggtcacactacgataacacgctcgtg
caggaaaccacagcgcttcatcggcgaccagaagtaatactaaatagcaattgtagacaa
gccgctacgtacggtcctgacagcagcttgaccgagaaaagtacgcccgcccctctctac
aagatgtattactctgatccatatcgagctggtggcggcagacaaaacggaattattgac
agcggcaggtgtggtgtttttagcgaggccgacaatgttgttacccaaaacacgaacggg
cttagggcgggagggtgtcccgtgtcacttgacactcggccacgtgacaacactattgtt
gcagaggtgcaaacagtaacttcgaaagggaatatttcaacaaagatcctaacgacgtca
catattcttcctcctaacttacatggtgttaatgaaagtttcgaccataatggggagaga
acccaggtgccaggaatggatcatttcgacggtctcccaatatggaataaagcgcaacga
aacgacgatagcgtgacggtaaagcaaccagcagacctatctgcgatcgagcaagtggga
aatgccgagttgaggaaaaaaagtatgtttgagcagaccttcacttcagcgttcacaagc
gcggaaccgaatcgctcgcaggcttcacatacgaccattgctgtcgcccagtcatcacag
gtagtcgatcataacgtggaaactaagagcggtgatatagtcgtaaagcagattttaacg
agcgccgatggctctctctcccatgtaagacgaacgaagggtcgcaattcgattaacgat
atcaattccgctgaattttatagctcctgcccgaagtctgacgcaacagaccaagtgact
gtaattgaagtgacagctaaagaatgcttttcaaactcggtgtgcgtggccgaagtgaga
agaagttcgtcattgtgtaggcgagcgacaacaacagaaacgcagcaagtgctaccaaca
aactgtctgcatcatagtcaagttaaaactacagtagtcagcgaccaaatcagccatgag
attttactcaatggtacaaatctaagaggaagttcgcaatatcgggtttcctactcaaac
gatttcaacaagccagtaactagtcccggaataactcaggattatctcaggccacctcgc
tgccagtcgtcgatcaatctgcaggagaacgtggataaaaccacaagtttccgaacaaag
agaaactcgttcctgtgttcgtcacaagccaatatactcaagcttaaactaagaaacagt
gtccgaaatcctgcgagcgagcacgatccgtcgtacaggaaaaggctttgtaaatcctta
acaaacattaccgccgacgatttacttagtgctccatgcgcttctatttatgattcgaat
ttggataattcacaagaaagcaaaagttcccaaagcgatttgttagcaagccgtatgcgg
acaaatcggacggaacttctccccgaagacctgcaaaagccaaacaacattaatttcacg
gtcggtgatttaaacgctgtcaattcaaagaaagaagtcccaccttcccaatctaactca
accaagaagttaaaacacgaaggcaaaagaagggttgacgacgaaatgtctcaatccgtt
ccaactcgcttgcaaaatgatggcgttaaattgaccagtgacaacaaaagtaaacttcta
tcatccagaaagacgcctaagctgtcgaagacgctatttcctttcatgcgtaaaaaccgc
aagcgccagaacaacatggcagaaaacgccacaggaaaaccgatgaaggcgaaagggaca
atcaacaacaagaatgcatcagattcagcaaccaataagattagtaagaaagacaatgga
aataacatttcggccgagccttccaaatctcacttaactaacacaaatacttcctttcca
caaaaagacggaatgggttccgtaggatttcgtaaactaaagataacttcacagcaaaat
gataggaacgtacacgctgattacgctacacgagttacaagggtacgacgccggtcatcc
aatgattcggaagacaaaagatcccgggaagaatctgaagggaatagaaaaccatacgaa
aaagttatactgcgcgaaaaacctcgtccgaggcgtcaaacttctcggagaagtacggaa
gacatttccaagtcagccacttcaacggatgacgtacttctcttacgtcatagtttaaat
gaccccgaactattcctccaatctgacccgacctccagtcaaggaaacttcaccttcgaa
aaggttcacgattccgttcaaagtgatggtttcaagcttcgtaaccacagcgtcgctcaa
acagaaggcttagaccagcagactcaccaacaagtgataaacagatgctctctcaacatt
gattacctccgctcatctaactacctggaccgtatgagtttcatcaggtcaatccctggc
ccggaaactacactcaacgggagcatatgtggaagcatgacagggataagtactccctgc
tcatctatcctcaccatagggatcggaacagctgcgagatgcagcctcgcatccagctac
gcgtcagtgtttgaagatgacaggaacatttcggatgttcgaaacgtgtcatgtgagatt
ggcgatccggaggcgagagctgactcttttgtgaaaccggacccaccaaagcagctccga
agagcaaaatccttatacaacccgccgaacttacagttgcgccagttcaaccgtagatct
gtatccccaaccttacaagatgatctttttgaatcgatgaaattgaaaacatccaatcca
gaaaactttcgcacaacagccagaccaccccaaccaaacaaaccaaccaccccaaaacct
cggaaaatgagcgccagtggaagttgttcatctcttaatatgtttaatttccgattatcc
cagcagaacatttgcaacacaaatgaaccagtggcaatatgtcgacccgcatcgtaccaa
tataaccaagaaatagttgcggattcgggggaaccccgcagcaaaatctctgccaagaac
tcctccatccgaaggcgaatgtcacttcaactcttaaaaccaaccaaccgtgacatgaaa
gcaattccaatcgtatcacagttaaacgacgaatacaagcgtcactcaatcgctggttta
gacgccgaaaaggttaagacagccatgacaagatggagcgctatcagcaacaacatgtcc
tcttcaaatagaagttcacgtcgaagaattcgtccattatccgaggttcaaaacttcaga
tgggatgttcaagccattcccgagcataacgaaataacaagtccatgcaatgaagaaata
atctccaaactaccgtccactcttccgcgaccgaaaactaaaccagactccgctacgcca
acaagcggaaatgggtgtgtccgcaaggtgccaccaaagacgaaaaaagtttcgatttct
gaagtgaactcgacttacgaagcaaacgactttgagatattacctcgtctatcattcatt
ggatctagttttagccaagaagaactttcttctcgaacaccatttgaccaggaaattttg
gttgaaacttgccaccttcgtaaagcattatccgttattggtggaattaacacgatgcca
gatagcttactgcacttttatcctactaagtattacaacgaaattggcaatcgaacgttc
cactcatactatggtgttcgagggcagcaagttcacgatgaaagatgtcgaatccaagga
agcatgtctggtatttcgaccgaatcgggttacgggaccatgacaaggaatggaacacgc
ttgagaactcctgataatgaagaggacgcggtgtttgtgaactcaaattcgaaccaactg
ggtggcggaacttcagctcagcagacaaatggagtcttcgtggaagcattgtgggatcac
gtgaccatggaccctgatgagcttggatttaaagttggtgacgtcatacgtgtaaatgac
atgtcgaatgctgattggtggtggggggaactcgattctgtggaagggtggtttcccgct
acctttgttaggattctcgtcaaccagcaaatccgtacagattcaaacaatagtgacatc
attgtttcgtcatacgcaagctcacaaagcgaggacgaaatctcagtgacgtcacacgag
ttttcacgcgtgacgtcatttaacgacatttgccaatgcacagagcaacgttcgacgaca
tccattcattgcaatgtttgcgggagaccactgaccgatgcgacgccagccagcagggcg
tcgatcgccaaccaaaccaaacagccagagattgtaataacgaaacctccttccaacgcc
cgcaaagcttccattacacgagaccaaattcgtgcaaacgtcatcaaagaaatagtcaat
tccgaaaaagtatttgtcggtcacctcaaagacgtagtacagggctacctgactcgttgc
cgaaaccgctccgacatgtttacagacgaagaactcaacactttgtttggaaacatagaa
gacatctatctgttccaacgggacttcgctgccgagcttgaggcgtcagtcgattcgtcc
tcagtacacacaaccgaactaggaaatgtttttctaaaacacaaagacggcttctgcata
tactcggaatattgtaacaaccatccacaagcactagcggagttggcacatttgttgacc
ttcaaaaaatacgttcattttttcgaagcttgtcgattattacaaaaaatgattgacatt
ccattagatggattccttttaactcctgtccagaaaatctgcaaatacccgttgcagttg
gcggaacttttaaagtacactcaccccgagcaccaggattacgatgccgttaaatctgca
ttagaagcaatgaagggcgttgcccacatgatcaatgaacgtaaaagaaagatggaaaac
gtgagaaagatatctcagtggcaagcaagcatcgtcaattggcagggtgagagcgtgctt
tccaggagtagtgagttggtacattccggggaggtatatgcgttgtcgcaagttaaatct
aaacccaaatcacgagtcgctttcttgtttgatcatcaaatgattctctgcaaaaaggat
ttgcttcgtcgcgatctcctatattacaaagctcgcatcgacttggacgctgttgaagtg
agtgccaccgaaccagactcacctaaatcctcacattccgggaatgactggcattcatcg
tcaagtttaggctcatgccaaggctggaaggttacagacacgaccactggcgagtccggt
ttaatgtactgcaagaatccagatgactgtggaaagtggatgaaagcgttcgcacttgaa
agaaaaatagctgaaaccaaagcaagtgggacgcctctcccaaccgaagcatattctctc
agcgtgttgcagaactccttgacagtctccagaaagccaaaagaggcgagtacacagagg
cttgcgccttcgtatcgataccgcataaaaatggcacaagaagtgcaagaattgtcggca
aagcagaccaactatgggtcggagaagtctggttttttcagcagcgtcgcaggaaagctc
actccattccgtcgcacacatacacgggaaagcagcttcgtattttaa
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integrated database retrieval system
