Ciona intestinalis (yellow sea squirt): 100183705
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Entry
100183705 CDS
T01056
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100183705
04082 Neuroactive ligand signaling
100183705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100183705
Ion channels [BR:
cin04040
]
Ligand-gated channels
GABA-A
100183705
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
100183705
NCBI-ProteinID:
XP_026691627
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Position
9:complement(2697532..2705537)
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AA seq
522 aa
AA seq
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MFCKFSLKTFLATNCFVWSYFNVVTAPASNSNQARPIRHSKNNNARSCNRKVCPEDITRT
LDNFLLNYDNRIRPGLEEGPTKVYSYFFVTGFGPASEQDMDYTLDMFFRQRWRDERLAFK
HMNKNITELKLNNNMVQRLWTPDSFFRNGKKSIAHNITVPNRLLRIDPNGNILYTMRLTI
KARCPMILIDFPMDVHTCHLVYGSYGYTKDQMQFLWYTENGRKPAVDVPSSSSRLNQFKL
INYTWTTNIINTISGEYSVLETKFHLKRQMGYFVIQTYLPCILIVILSQISFWINKEAVP
ARTVSGIMTVLSLTMLSISTRQSLPKVAYATALDWYMAVCFAFCFAALIEFASVNYFQMQ
IEQSKSKEKTDSSNDKKDVIESSIFHSCSALRKRVLEIKRSDGTMNVNLSDLFKMASGMA
PGEKLGFRYYFCRLASLVLPKNWIRESTDRNHINSSDQELARKLLLAAEAEINEAAMSQG
GVSRIDRVSRVAFPLAFFFFNGIYWFVYLSHQTHEVAYRLGT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtaaattttcgttaaaaacttttttggcaacgaactgttttgtctggtcgtat
tttaatgtcgtcacggcaccagcatcaaacagtaaccaagcgaggcctattcgtcattca
aaaaacaacaatgcgagatcctgcaacagaaaagtttgtccggaggatattacccggacg
ttggacaatttcttgctaaactatgacaacagaatacggccaggcttggaagaaggaccg
acaaaggtctacagctacttttttgtaactggattcgggcctgcctcggagcaggacatg
gactatacgttggacatgttcttcaggcaacgatggagagacgagcgattggctttcaag
cacatgaacaagaacatcactgaactaaaactcaacaacaatatggtgcaacggttatgg
acacctgacagcttttttcgaaacggaaaaaagtcgatcgctcataacataacagttccc
aacagattactacgaatagatccgaatggcaacatcctgtacactatgaggttaacaata
aaagcaaggtgtcctatgatccttatagatttcccaatggatgttcacacctgtcatctt
gtatatggaagttacggctacacgaaggatcagatgcagtttttgtggtacaccgagaat
ggtaggaaaccagctgttgacgtcccttcttcttcttctcgtttgaaccaattcaaattg
atcaattatacttggaccactaatattataaacacgatatctggcgagtactccgtctta
gagacgaagttccatctaaaaagacagatgggttatttcgttattcaaacttatctgcct
tgcattcttattgttatcttgtcccagatttccttttggatcaataaagaagcagtgccg
gcaaggaccgtctctggtatcatgactgtactaagtttgaccatgctgagtatcagtacc
cgtcagtctctccccaaagtggcttacgcaacggcgctagactggtacatggcggtgtgt
tttgcattttgctttgcggctttaatcgagtttgcgtcagtgaattattttcaaatgcaa
attgagcaatcgaagtcgaaggaaaagacggatagcagcaacgataaaaaagacgtgatc
gaatctagtattttccattcttgttctgcattaaggaaaagggtgcttgagataaaacgt
tccgacggtacaatgaatgtcaatttgagtgatttgtttaagatggcttccgggatggca
cccggagaaaaacttggcttcagatattatttctgccgcttggcgtcgctagtgcttcca
aagaactggatcagagaaagtacggatagaaatcatataaattcatccgatcaggaactt
gctcggaagctccttctagcggctgaagcagaaataaatgaagctgccatgtcacagggc
ggagtcagcagaattgaccgcgtatcgagggtggctttcccgctggctttcttctttttt
aacgggatctactggtttgtctatttgtctcaccaaacccacgaagttgcatacagatta
ggcacttga
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