| Entry |
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| Name |
(RefSeq) exosome complex component RRP46
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| KO |
| K12590 | exosome complex component RRP46 |
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| Organism |
cin Ciona intestinalis (yellow sea squirt)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cin00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100183725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cin03019]
100183725
Messenger RNA biogenesis [BR:cin03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100183725
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
10:complement(2585755..2587160)
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| AA seq |
233 aa
MKDDMHEVVEQPPTSKFQCEMNALKNADGSAFYSQGETSVMVAVYGPGDLKETKQEIDKA
LVEVDFRPKLGSPTVNEKYLERFVQGVCENAIMLALHPRTAFAIIVQIMQDQGSLLSCAI
NAVCVALQDAGVSMKHLPVAVTVALRKESESELEDATDVLIINPTIKEESESFSILTFVF
DSVNKNLLCMHSQGPLLPKQHERCLKAAKEATEEVLKFFRDSVTQKVAAGLEL |
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| NT seq |
702 nt +upstreamnt +downstreamnt
atgaaagatgatatgcatgaggttgtggaacaaccaccaacttctaaatttcaatgcgag
atgaatgcattgaagaatgcagatgggtctgctttctattctcagggtgagacctcggtc
atggtagcagtgtatggtcccggtgacctgaaagaaaccaaacaagaaattgacaaagcg
ttggttgaagtagattttcgcccaaaactcggcagtcctactgtcaatgaaaaatatttg
gagcgttttgtacaaggagtttgtgagaatgctataatgcttgcccttcatccaagaact
gcatttgccataattgtacagattatgcaagaccaaggatcgttactctcctgtgccatt
aatgcagtgtgcgtggcacttcaagatgccggtgtgtccatgaaacatttaccagttgct
gtcactgttgctttaaggaaggaaagcgagagcgagttagaagatgcaacggatgtgctt
attattaacccaacaataaaagaagagtccgaatcattttctatcctcacatttgtattt
gatagtgtcaataagaaccttctttgcatgcactcacagggccctctgctgccgaagcag
cacgaacgttgtttaaaagctgcgaaagaagctactgaagaagttttaaagttttttaga
gactctgtaactcaaaaagtggctgctggattggaactttaa |
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