| Entry |
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| Name |
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
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| KO |
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| Organism |
cin Ciona intestinalis (yellow sea squirt)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cin00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100183747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cin03019]
100183747
Enzymes [BR:cin01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100183747
Messenger RNA biogenesis [BR:cin03019]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100183747
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:complement(4885934..4890156)
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| AA seq |
430 aa
MASVKPEEKGIDLSITQDYKLAKDNELRFEVESNARVKLDLLEGSAEVFGTELVRSRSYI
FESGAKIAVFTWFGCSVKLSGKVEASYVSKDTPMVIYLNTHAAVEQLRKSAEQDDIRGPR
VLVVGAQDVGKTTVCRLLLNYAVRLGRKTTLIDIDVGQGGVSIPGSVGALTVERPADPVD
GFDLKVPLVYHFGHTAPNGNIKLYETLISRLADVFNAKCDYNKQVKHSGCIINTCGWVKG
QGYQCILHTAQSFEADVVLVLDSERLYNDLKRDLPDFVNVILQPKSPGVVERPREARRDN
RENKIKEYFYGPRKIYFPHAFNIKFSEVEIYKIGAPSLPDSCLPLGMEPENTQTKLVQVT
PGRDMTHHILSLSMAESLDENLIETNVAGFVVVTNVDPDNQVFSVLSPAPRPLPRKYFLI
MDIRFIDINK |
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| NT seq |
1293 nt +upstreamnt +downstreamnt
atggcttctgtaaaaccggaggagaaaggaatagatttgtcaataacgcaggattacaaa
ctcgcgaaagacaacgagttacgatttgaagttgaatcaaacgcgcgagtgaaattggat
cttcttgagggaagcgcggaagtgtttgggacagaacttgtcagatcgagatcgtatata
tttgaatcgggggcaaagatcgctgtcttcacttggtttggatgttcagttaaactatca
gggaaggtggaagccagttatgtatcgaaggacacacccatggttatctacctcaacact
catgcggccgtcgagcaactaaggaaatctgcggagcaagatgatatccgaggccctcgt
gtgttggtagtcggtgcgcaagacgtggggaagacgacagtttgtaggttactgttaaac
tatgctgtccgtctcggtcggaaaacaactttgattgacatcgacgtcggacagggtggt
gtctcgatacccggttcagttggtgcgttaaccgtcgagcgacctgctgaccccgtagat
gggttcgatctaaaggtaccgttggtttaccactttggacacactgcaccgaatggaaac
atcaagctatacgaaacattgatatcaagacttgccgatgtttttaatgctaaatgtgat
tacaacaaacaagtgaaacacagtggttgcatcattaacacatgtggctgggtgaagggt
caaggttaccaatgtattctacacactgcacaatcgtttgaagccgacgttgtccttgtt
cttgatagtgaacgtttatacaatgatttgaaacgggatttaccggatttcgttaatgtt
atacttcaacccaagtctccaggtgttgttgagcgaccgcgtgaggcaagacgggacaac
cgtgagaataaaatcaaggaatatttctacgggccacgaaagatatattttcctcatgct
tttaatattaagttcagtgaagttgaaatttataaaatcggagctccgtcgttgccggat
tcatgtttgccattgggtatggaaccagaaaacacacaaacgaagcttgtccaagtaacc
ccgggtcgtgacatgacacatcatatattaagtctaagcatggctgaatcacttgatgaa
aacctcattgaaacaaacgtagcggggtttgttgttgtaactaatgttgaccccgataac
caggtgttcagtgttttgtccccagcgcccagacctttgccaagaaaatactttttaata
atggacattcggttcatagatattaataaataa |
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