Ciona intestinalis (yellow sea squirt): 100183865
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Entry
100183865 CDS
T01056
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100183865
03037 Cilium and associated proteins [BR:
cin03037
]
100183865
Transporters [BR:
cin02000
]
Other transporters
Pores ion channels [TC:
1
]
100183865
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
100183865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100183865
NCBI-ProteinID:
XP_026691071
LinkDB
All DBs
Position
7:3994767..4006396
Genome browser
AA seq
858 aa
AA seq
DB search
MKTVKETSYGLEDILMEMPSRTLGRRRGAFIEDVVASGRQDYNTGTFSRSTYSRRFGSNR
RHRRIMEVGGGDEQMAEEIFKEIIEDNKEVDNEEIRAIAVNMKIKRKIRRQAFTNRETKK
KNKIGCWWIFRHNMSLKFRHFKEDTRKLFASAKLWDYHLKQVEGNFGSGVHSYFTFLRGL
FLLSIPSFILSFSFISIPQLLDPPARNHPEVKFTGEELITGANWFTETIMYYGYYTNGTI
QTIPGSVYKMPLAYLLATAGYFLLCLLWLVKSTATSFRKNYIEAKEDESDFISKVFCAWD
FGITSDDASKLQHTMISTELKEILAEKRRHKESRSSAKKCKVFLYRLVTWMLYLGITGGC
MALVYFVNKELLNKIKDSLEGIVVLQQISLALIISAINLVMPIFINLMTHWEDYKYPRHE
MYIAVFRNFLLKLGMLAVICAFWTDGNLKSTHTNQTASCWETDLGQEIYRLVIIDFLFTI
IFATFCAEFIRKLLTKCIPSLKLAEFSIVNNVMDLIYGQTLCWIGIYFSPLLSLIIIVKY
FLVFYIKKVSVMQNCRMSTQRWRAAQSQTLFNAFLLLSFLLCAAFLCVVVFLETPSYDCG
PYRGLNRSYDAIIIEFQRLASDESSYWFAVIMNVISSVWFLYSIVVVLSTAVVLVRSRSI
GYRKFAKALREQIALEGQDKALLLQWLRDVSTNHGQSSGGQHVVPLLKRHRDSIHSNSTS
APPSRHNSISREFQRESDILTYVDPQHLDASHLKISDGSPGKVRKREHKDPLLHKALVNQ
AKRPATLYMEHNAGDVFGSARQSPEDQIRSSSFSNPQRNNSPSTSSSNHDNRAALAMSLA
NQHPTEPSSPVYYDEGTF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggtgaaagagacttcatatggattggaagatattctcatggagatgcctagt
agaactctaggccgcagaagaggagcgttcattgaagacgtggttgcatcagggaggcag
gattataacacagggactttttcacggagtacctactcccggaggtttgggagcaaccgg
aggcatcggaggatcatggaagttgggggaggagatgagcaaatggcggaggaaattttt
aaagaaattattgaggataataaagaagtcgacaacgaagaaattcgagctattgcagtg
aatatgaaaattaaaagaaaaatcaggagacaagcctttacaaacagagagacaaagaaa
aagaataaaattggttgctggtggatatttagacacaatatgtcattgaaatttcgccac
tttaaagaagatacaagaaaactgtttgcttcagctaaattgtgggactaccatctgaaa
caagtggaagggaattttggttcaggagttcactcttacttcactttcctccgagggctc
ttcctcctctccattccctcctttatcctcagcttctcgttcatctcgatcccgcagctc
ctggatcctccagcgaggaatcatccggaggtaaagtttacgggggaggaactgatcact
ggagcaaactggtttactgagaccatcatgtattatggttattatacaaatggaacaatt
caaacaatacctggatctgtgtataagatgccacttgcctatctactagctactgctggc
tattttctgctgtgtctactatggctggttaaatcaacagctacatcgtttcgaaaaaat
tacattgaagccaaggaagatgaaagtgattttatcagcaaagtattttgtgcttgggat
tttggaattacatcagacgatgcctctaagttgcaacatacaatgattagtacagagtta
aaggaaatattggccgagaaaaggcgacacaaggaatctagatcttctgcaaaaaaatgt
aaagtttttctttaccgtctcgtaacatggatgttataccttggtatcactggtggttgt
atggctttagtttattttgtcaacaaagagctgcttaataagatcaaggattcactggaa
ggaattgtggttttacagcaaataagtttagccctgatcatatcagccatcaatcttgtg
atgccgatatttatcaacctcatgacacattgggaagattataaatatccaaggcacgag
atgtacatagcagtttttagaaattttcttttaaaacttggcatgcttgctgttatttgt
gcgttttggacggatggaaatttgaaatcaactcatacaaatcaaacggcttcatgttgg
gaaacagatcttggtcaggagatttatcgacttgtaataattgactttctattcacaata
atatttgcaacattttgcgccgaatttataagaaaattattaacaaaatgcattcctagt
ttgaaactggctgaattttcaattgttaacaatgtgatggatttgatatatggtcaaaca
ttatgctggattggcatttacttcagcccacttctatctctcattattatagtgaaatat
tttctcgtgttttatatcaaaaaggttagtgtgatgcaaaattgtcggatgtcaactcag
cgttggagggcggctcaaagtcaaacgttgttcaacgcgtttttacttttaagtttcttg
ctgtgtgccgcattcctatgtgtagtggtgtttctcgaaacaccatcatatgattgtgga
ccataccgtggtttgaacagaagttatgacgcgattattatcgagtttcagcgactcgcg
tcggatgaatcaagttattggtttgctgtcattatgaacgttatatccagtgtttggttc
ctatattctatcgtggtcgtactttccactgcagttgtgttagtacgaagccgatcaatt
ggatatcgtaagttcgctaaagctctacgtgaacaaatagcattggaaggacaagacaaa
gcattattgctgcagtggttacgcgatgtttcaaccaatcatggacaatcttctggtggg
cagcatgttgtcccactgctgaaacgacatagagattccattcactcaaattcaacctca
gcaccaccgtcccggcataactcaatatcgcgcgagtttcagcgtgaatctgacattcta
acatacgtggatccccaacatcttgacgcaagtcatctgaaaattagcgatggatcacca
ggcaaagttcgtaaacgagaacataaagaccctcttttacataaagctcttgtaaaccaa
gcaaaacgacctgctactctgtatatggaacataatgctggtgatgtttttggaagtgca
agacaaagtcctgaagatcaaatcagatcaagcagtttctcgaaccctcaaagaaataat
agtccatcgacctcatcgagtaaccatgacaatcgtgctgcccttgccatgtcattagca
aaccaacatccaacagaaccatcctcacctgtatattatgatgaaggaacattctaa
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