Ciona intestinalis (yellow sea squirt): 100183868
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Entry
100183868 CDS
T01056
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
100183868
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
100183868
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
Motif
Other DBs
NCBI-GeneID:
100183868
NCBI-ProteinID:
XP_002119819
Ensembl:
ENSCING00000020212
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Position
2
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AA seq
578 aa
AA seq
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MECVTKFCVSVTDQMPKECSVFLVGDGNKLGNWKPTDAVKLDLTEAQWEIEMCLNAKEQI
RYRYFIGAMYEGAVVIKQFEVHPTFMTRSIVVPEKENLVVKDIFGVAGDLQSVDCGWLTS
QTEIRVLISSTQGHPITFNKNFGNGMLNKSKLKIKPIAHGDIIGISTTVIEPFQSQQIVN
IPNAGLKIPEDEQMCLLFSMQTLNASSCSINLEIYDNDKRLGVATVAFGALSTSKQALNI
AVIDDNFLCIGVLKISYLRISPFQCEALNMERLFSRHWKPKPMVHIGHRGSGNSFTSKLI
ANVPENTVASFKQANENRAQLVEFDVHLTKDMIPIVYHDLTTSCKVKTKEEPGDVLLEMP
VFHFTLKELQSLDMKHRSRITNTRKLDFNEQDTSPDMQMFPTLKTVLTDVPVETGFDIEV
KWPTLDINNEFEDGLESYIDANVFVDTILKAVYESAGSRRIMFSSFDIDICILLKRKQGK
YPVFLLTNGDTNFYTPLLDPRERTNGMAVGSCLAEQFLGVITLDKDVYQTPEVIKKIKSA
GVVFGCYGDEVTDNLPMMKQLNVDIAIYDRISKELAKI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgttactaaattttgtgtttctgtaactgaccaaatgccaaaggaatgttcg
gtgtttcttgttggcgatggaaacaaactgggcaactggaaaccaactgatgctgttaag
cttgatttgactgaagctcaatgggaaatagagatgtgtctgaacgcgaaggagcaaata
aggtacaggtactttattggggcaatgtatgaaggtgctgtggtgattaagcagtttgaa
gttcatcctacattcatgacaagaagtattgtggtccctgagaaagaaaatcttgtggtt
aaagatatatttggagttgcaggcgatttacagtctgttgattgtggttggctgacaagt
caaactgaaatacgagttttaatcagttcgactcaaggtcacccgattacttttaataaa
aatttcggtaatggcatgctgaacaaatcaaagctgaaaattaaaccgattgctcatgga
gatatcatcggcatatctaccacagtgattgagccttttcagtcgcaacaaatagttaat
attccaaatgcaggccttaaaatacctgaagacgaacaaatgtgtttgttattttccatg
caaacattgaatgcttcctcctgttcaattaatcttgaaatttatgataatgataaacga
cttggagtagcaacagttgcattcggtgctttatccacttccaaacaggccctcaatatt
gctgtaattgatgataactttctctgtattggggtccttaaaattagctatctacgtata
tctccattccaatgtgaggcacttaacatggagagattgttctccagacactggaaacct
aaacccatggttcacattggacataggggaagtggtaattcatttactagtaagttgatt
gcaaatgtcccagaaaatactgtggcttcatttaaacaagccaatgaaaatcgtgcccag
ctggttgagtttgatgttcatttaactaaagatatgattcctattgtttatcatgacctg
accacttcatgcaaagtaaaaactaaagaagaacctggagatgttttacttgagatgcct
gtttttcattttacacttaaagaacttcagagtttagatatgaagcacagaagtcggatt
accaacaccagaaagctggatttcaatgaacaagatacaagtccagatatgcaaatgttc
cccacattgaaaactgttctaactgacgttcctgtggagactggtttcgacattgaagtg
aaatggccgacgttagatataaataatgaatttgaagatggacttgaaagttacatcgat
gcgaatgtatttgtggatacaatattaaaggcagtgtatgaaagtgctggatcgcgtcga
atcatgttttcttcatttgatattgacatttgcattttattaaagaggaagcagggaaaa
tacccagtgtttttacttactaacggtgacaccaacttttatacaccattgctggatcca
cgtgagcgcacaaatggaatggcagtgggcagctgtcttgctgagcagtttcttggtgtg
ataactttggacaaggatgtataccaaactcctgaggtgatcaaaaagattaaatccgcc
ggagttgtatttggctgctatggagatgaagtcactgataatttaccaatgatgaaacag
ttgaacgtggatattgcaatctatgatagaatatctaaggaacttgccaaaatctaa
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