Ciona intestinalis (yellow sea squirt): 100183879
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Entry
100183879 CDS
T01056
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100183879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100183879
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100183879
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SDF
CENPU
Motif
Other DBs
NCBI-GeneID:
100183879
NCBI-ProteinID:
XP_002124271
Ensembl:
ENSCING00000007497
LinkDB
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Position
5:complement(198129..204388)
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AA seq
513 aa
AA seq
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MGFTCKQFVKKNALLLATVSGVVLGIVLGIAMREAKLSQLDIAYFSFPGDILLRMLKMMI
LPLIVCSLITGVATLDQKASGKLGALAVTYYMTTTLIAVIIGIVLVVTINPGRAGKETID
STGSSISVEAVDALTDLIRNLFPENLVQACFQQYQTMREPITEERNITSLLPIVNETIGT
TVGYQVTTVVEQNVTIDYRLVGSYKLGINVLGMISFCITFGIIIGRMGDEGVILVKFFSA
FNEAVMKIVGIVIWYAPIGIIFLIAGEIMKMEDPAKVLEQLGLYMATVIAGLAIHGILVL
PLIYFIVVRKNPFAYLSGVLQALLTAVATSSSSATLPVTVNCLEQNNKLDKRVTRFVLPI
GATINMDGTALYEAVAAIFIAQANGIVLNFGQIVTVSVTATFASIGAAGVPQAGLVTLII
VLTAVGLPTEDITLILAIDWLLDRLRTTVNVLGDSIGAGVVAHLSRKDLHLDSDPDDATT
DVTVDKRPPSYTSDVFENDAMNESKDQFSFTKM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggttcacgtgtaaacaattcgtaaaaaagaatgcattgctgcttgccaccgtatct
ggtgttgttcttggcatcgtgctcggtatcgccatgcgggaagcaaagctatcgcagctc
gacatcgcttatttctcatttcccggcgatattttgcttcgtatgctcaaaatgatgatt
ctgccgcttatcgtatgcagtctaatcacaggagttgccacacttgatcaaaaagcgtca
ggaaaattgggagctttggctgtcacgtactacatgacaactacgcttattgctgtgatt
ataggaattgttcttgtggttacaattaacccagggagagcggggaaggaaacgattgat
tctacaggaagtagcattagcgtcgaagctgtcgatgctttaaccgacctcataaggaac
ttgtttccagagaacttggttcaagcttgttttcaacagtaccaaacaatgagagaacca
atcacagaagaaaggaatattacctcattgttgcctattgtcaacgaaacaatcggtaca
acagttggttatcaagtgacgacggttgtggaacagaatgtgacaatcgattatagattg
gttggaagttacaaactaggtatcaatgtgctcggaatgatcagtttctgtatcacgttc
ggtattatcattgggagaatgggagatgaaggtgtaatattggttaagttcttttcagca
tttaatgaagccgtaatgaagattgtaggaatcgtaatttggtatgcaccgatcgggata
atctttcttattgccggtgagatcatgaaaatggaagacccagcaaaggtattggaacag
ttagggctatacatggcgacagtgattgcaggactagcaattcatgggatattagttctg
ccccttatatactttattgttgtacggaagaacccattcgcctacttgtcgggtgttctt
caggcacttctaactgcagttgcaacatcgtccagttcggcgaccctgccagtcacggtg
aattgtctcgaacaaaacaacaaacttgataaacgagtaacgaggttcgttcttccaatc
ggagccactatcaatatggacgggacggctttatacgaggcggtagcagccatattcatc
gcacaagcaaatgggattgttctgaactttggtcagatagttactgtcagtgtcactgca
acattcgcaagcattggtgctgctggagtgccacaggctgggttggtaaccctcatcatc
gtgttgactgcggtgggcctaccaactgaagacattacacttatccttgcaattgattgg
cttctcgatcgacttcgaaccacagtcaatgttctcggtgattccatcggcgcaggtgtc
gttgcacacctcagtaggaaagatcttcatctcgattctgatcctgacgatgcaactact
gacgtcacggtggataaacgaccaccaagttacacgagtgacgtgttcgagaatgacgca
atgaatgaatctaaggatcaattttctttcaccaaaatgtaa
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