Ciona intestinalis (yellow sea squirt): 100183971
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Entry
100183971 CDS
T01056
Name
(RefSeq) coiled-coil domain-containing protein 50
KO
K25949
coiled-coil domain-containing protein 50
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100183971
Membrane trafficking [BR:
cin04131
]
Autophagy
Other autophagy associated proteins
Others
100183971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
100183971
NCBI-ProteinID:
XP_002120528
Ensembl:
ENSCING00000007580
LinkDB
All DBs
Position
1:7950808..7956630
Genome browser
AA seq
448 aa
AA seq
DB search
MASAKYSSIEQEPVRPVTEAVQEYRVIEDGALAYHLQEREIEHHYACNVENRRTVMQDIR
TAQQLQDEEDRRARIFTLEQQAQLEKTDEKLAEAYQEKLLKKHLQKEQERKEREERDNEI
AFMLMERERRRERRQQAVDRDLAEKMSRMPTKTMERMKKMTDEELAQRLQAEEDKKLLIK
EREKKNLKAVVEMQDEELARYIHEREIEENSMAQRDSKDKSKRKKQRSIKSHENHPHLHH
NDKRTPPHDHPRNLPSRPDPRRNGGSMRDETDRTNPPNRPPPPRTREEDETNPKSIHNFT
PARRQVKSDHDVDDCVHRRTKSERPRRPPQPSRDHHEFERRNSELSRDHNASRNHNTSRD
NPASRDHNVSRDSPTSRDEQRRKLTSKEERFRQATNNNNQHPAVDPDISDDIPYSERFAR
LAAQESWNYDQVPTEHMRKKNKGDCKQQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaaaatattcttcaatagaacaagaacctgtacgtcctgttactgaagct
gtgcaagaatatagagtgatagaagatggggcgttggcttaccatctgcaggaacgagag
attgaacaccactatgcttgcaacgtggaaaacaggagaactgtcatgcaggacatcagg
acagctcagcaactccaagatgaggaagacagacgagcaagaatatttactctggagcaa
caagctcaactggaaaaaacagatgaaaagcttgcggaagcttaccaagaaaagttgctt
aaaaaacatttgcaaaaagaacaagaaagaaaagaaagagaagaaagagataatgaaata
gcattcatgttgatggagagagaaagaaggagagaaagaagacagcaagctgtagatcgt
gacttagctgagaaaatgagtcgaatgccgacaaaaacaatggaaagaatgaaaaaaatg
acagatgaggaacttgcgcagcgtttacaggcagaagaagacaaaaaacttttgataaaa
gaaagggaaaagaaaaacctgaaagctgtagttgaaatgcaagatgaagagctagctaga
tatattcatgaaagagaaatagaggaaaattccatggcacaaagagattcgaaagacaag
agtaaaagaaaaaagcaaagatcgataaaatcacatgaaaatcatccacatcttcatcac
aatgataaaagaactcctcctcatgatcatcctcgcaacctcccatcaagacctgatcca
cggaggaatggaggaagcatgagagacgagacagatcgaacgaatcctcctaatcgtcct
ccacctccacgcacacgtgaggaagatgaaacaaacccgaaatcaatccacaattttact
cctgcaagacggcaagtaaaaagtgatcatgatgttgatgattgcgttcatcgacgaacg
aaaagtgaacgacctcgacgacctccccagccatcacgtgatcatcatgagtttgaaaga
cggaactctgaattatcccgtgatcataatgcatcacgtaatcataacacatcacgtgat
aaccctgcatcacgtgatcataatgtatcacgtgatagccctacatcacgagatgagcaa
aggcgtaagttaacttccaaagaagaacgttttcgtcaggcaacaaataacaataaccaa
catccagctgtagatcctgatatatctgatgatattccatacagtgaaagatttgctaga
cttgctgctcaagagagttggaattatgaccaagtcccaaccgaacatatgcgtaagaaa
aacaaaggcgattgtaaacagcagtaa
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