Ciona intestinalis (yellow sea squirt): 100184044
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Entry
100184044 CDS
T01056
Name
(RefSeq) general transcription factor 3C polypeptide 5-like isoform X2
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100184044
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
100184044
TFIIIC, fungi type
100184044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
100184044
NCBI-ProteinID:
XP_002130110
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MENKINLKSKFDQNTSFVCVEYPGKVQSVQNMLQTLGGLDNVTKVYRDSTQRLDLRYRPG
DPSCKPVCADYVKTTAVLMKVLKYRKKKTEGDNSKPDFRYRQSICGIVKGAYRFKTLCDF
QFMSLKRSKVVNSNMINLVPSLCCLQVDFEDKFFKQEASLFLPPPTFSRIDMVQEYNWRK
ETTSLANKRGNSVIGVSRKSRPHDGICIKFNDDVPSTYLPRAFDAYKKYFGDDKEGYRSK
LIQLFSDRPVWSKNAILAKMNLNFVSLKVLLPTVAYYYITGPWRSLWVRYGFDPREAPEA
KVYQLLDFRLRQGMNTPFIPVKAKRSTFHYKLPNMSLKWRGSGGGVKTLFNSDGETSKDS
SFSELKPNDSVYIYEPGVLPAYRQMFYQACDIKLPEVEQLISRQPPGELKCTEKDGWFVP
GTAHEVRNSLSKDIFKTISTMKYGSEGGDADIDIMFARKSKTRASGRNRMMFRSNIDADV
SSEAVSDTRTEEEEETWSRSSSTEDEEEEEDVVDEDDLFEEQQSPEEMIIETASLLADIS
RSSDV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaataaatctgaaatccaagtttgatcaaaacacaagttttgtttgcgta
gaataccctggaaaagtacagagcgtacaaaacatgctacaaacacttggtggattggat
aacgttacaaaggtttatagagactccactcaaaggttggatttaagatacagaccagga
gaccccagttgtaagcctgtgtgtgcagactatgttaaaactacggcagtgttgatgaaa
gttttaaaatatcgcaagaagaaaacagaaggtgacaacagtaaaccagatttcagatat
cgacaatcaatatgtgggattgtaaaaggagcttacagattcaaaactctctgcgatttc
cagtttatgtcgttgaaacgcagcaaagtggtcaacagcaatatgataaacctcgtgcct
tcactttgttgtcttcaagttgattttgaagataaattcttcaaacaggaggcctcgtta
ttcctcccaccccctacttttagtagaatagacatggtgcaggaatacaactggaggaaa
gaaacaacgtctcttgctaataaacgaggtaattctgtcatcggtgtttcacgtaaaagt
cgaccacacgatggcatctgcattaaatttaacgacgatgtcccgtcaacttacctacca
cgagcgttcgatgcttataagaaatatttcggtgacgataaagaaggttacagatcgaag
ctaatacagttgttcagtgatcgccctgtttggtccaaaaacgcaattctcgccaaaatg
aatttgaatttcgtctctttgaaagttttgttgccgactgtcgcttactattacatcact
ggtccatggagatcgctatgggtgagatatggttttgacccgcgtgaagctccagaagcg
aaagtttatcaactgctggatttcaggctaagacaaggtatgaacaccccgtttatcccc
gtcaaagcgaaacgaagcacttttcattacaaacttcctaacatgtcattgaaatggagg
ggaagtggtggaggggtgaaaactttattcaatagtgatggagaaacatcaaaagattct
tcattcagtgaactcaaaccaaatgattccgtttacatttacgagccaggagttttaccc
gcgtacagacaaatgttttatcaagcttgcgatatcaaattaccggaagttgaacaattg
atatctcggcaaccaccaggggagctaaagtgcaccgagaaagatggttggtttgtgcct
ggcacggcacatgaggtccgtaactctctctctaaagatattttcaaaacaatctccact
atgaagtacgggagcgagggaggggacgcagatatcgacatcatgtttgcgcgtaaatca
aagacacgggcatctggtagaaaccggatgatgtttcgaagcaatattgatgcagatgtt
tcctctgaagctgtttcagacacgagaacagaagaagaagaagaaacatggagcagatct
tcatcaacagaagatgaagaggaggaagaagatgttgtggatgaagatgatttattcgag
gagcaacaaagtccggaggagatgatcattgaaactgcatctttgcttgccgacatctca
agatctagtgatgtttga
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