Ciona intestinalis (yellow sea squirt): 100184064
Help
Entry
100184064 CDS
T01056
Name
(RefSeq) protein CROWDED NUCLEI 3-like
KO
K17339
atlastin [EC:3.6.5.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184064
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100184064
Autophagy
ER-phagy
ER-phagy recepters
100184064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
RF3_C
RNA_helicase
UPF0020
Motif
Other DBs
NCBI-GeneID:
100184064
NCBI-ProteinID:
XP_009860717
LinkDB
All DBs
Position
14
Genome browser
AA seq
845 aa
AA seq
DB search
MSKQHGKSGVKSEAIVVIRKGKPQLKLDRLETILHNYQDHPVAIISVFGEHRTGKSFLLN
FLCQYLRENQSADWYKKNYVKLVNTFHWKGGVERDTTGIYMTDKPFMLKNDKGQDIAVFL
MDTQGSFQKKFKTGECSLMFGLSTLLSSVHVYNLSSGLIRDNDFQHLEVFNKYAQALTER
NGEGNAPIPSPFQGLMFLVRNWEMSDYEPGSKGGMEYLTEVIKAEEDGNDSVRKQIMKSF
SDVRCHLLPHPGVKVTKYKDSSRSSIKLADLDESFLVGVDDLGNCLFSKKNLLVKQLNGG
TCTGKEIMKLALEFKERIKSSDTPNVHTLLKINETVGFCQKLQDFEAEYEKNMITKMGEN
YMEPKMLLSLHEECQEETLSKYAEHEGLTEEKSLANKNYMRQCLSVAFKAMQHKNNARKE
NEKILIVGKAALAVENVYLDEMEKVASGQYLEDLTTAREKAVKATEELFQASTLDCNQDL
VKKCTKDLHNAVKSKHREFKRKNAERLETLDQKLSMLVVETAMSYEALMEKEIKKTKSEA
DLDRAHQNAHKASVKKFEENDLVKGLGLKCKKDKVQSLSDKITECFQTLKKGTETPKSEN
EEQPEQDNKMNYVQQQKEAQALFEKRKELALNYSTAYNDHKEKYVEDGELYKIHIKAKQQ
ALKAFSDFGKDISSVAIENYWENKDALEQELEQLFDQVKENNVKNKKNIERSLNPFYEEL
SADYLRTMNKASRNASDATLGTLHEVLVSSINEELNVEIPYENIQQIAIATCEGMLREQQ
DEVNNGRNIWKELMDQAGASTVGLSVAKTGSKDGRDSVAIESILANFNVNISQLASIQFL
KSIKF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacagcatggaaaatcaggtgttaaatctgaagcaatagttgtgataagaaaa
ggaaaacctcaactaaaactagatcggcttgaaacaattcttcacaactaccaggaccat
cctgttgctatcataagtgtgttcggggaacatcgaacgggaaaatcttttctactaaac
ttcttatgtcaatatctgcgagaaaatcagtctgcagattggtacaaaaagaactatgta
aagctggttaatacgtttcattggaaaggcggcgttgaacgcgatacgactggaatttat
atgacagacaaaccgttcatgctaaagaatgacaaggggcaggatatagctgtgtttttg
atggacacgcaaggttcgtttcagaagaagtttaagacaggcgagtgctcgctcatgttt
gggttgagcactttattgagttctgtacatgtctacaacttgtcatcaggattgattcgg
gataacgactttcaacatttagaggtgtttaataagtatgcccaagctctcactgaacgt
aatggtgaaggaaatgctcccattccatccccatttcagggtctgatgtttctggttcga
aactgggagatgtcagattatgaacctggcagcaaaggagggatggaatatttgacggaa
gttataaaagcagaggaagatggaaacgattcagtacgaaagcagatcatgaaaagtttt
tccgacgtccgatgtcatttgttgccacatcctggggtaaaggttactaaatacaaagac
agcagtcgttccagcattaagctagcagatctagatgagagttttcttgttggagtggat
gatcttggtaactgtttgttttcaaaaaaaaatttgctcgtaaaacaacttaatggtgga
acttgcactggtaaagaaattatgaagctagcattggaatttaaagaaagaatcaaaagt
agtgatactcccaatgttcatacattattaaagataaatgaaacagttggattttgtcaa
aaacttcaagattttgaagcggaatatgaaaaaaatatgataactaagatgggtgaaaat
tatatggagcccaaaatgttgttaagccttcatgaagaatgccaggaagagacattatcc
aaatatgcagaacatgaagggcttactgaagagaaaagtttggctaataaaaactatatg
agacaatgcttgagtgttgcatttaaagcgatgcaacataagaacaatgcacgaaaggaa
aatgaaaagattttaattgtcggaaaagcagctcttgcagttgagaatgtatatttggat
gaaatggaaaaggttgcaagcggccagtatttggaggatctgactacagcaagagaaaaa
gctgtgaaagcaacagaagaattatttcaagcttccactcttgactgcaaccaggacttg
gttaagaagtgcacgaaggatctacacaatgctgtcaaatcaaaacaccgggaatttaaa
agaaaaaatgcagaaagattggaaacactagatcaaaaactgtcaatgttggttgttgaa
actgcaatgagttatgaagctttgatggaaaaggagattaagaaaaccaagtccgaggca
gatttggatcgcgcacatcaaaacgcacacaaggcttcagtaaaaaaatttgaggagaat
gatcttgttaaaggattggggttaaagtgcaagaaagataaagttcaatctttgagtgac
aaaatcacagagtgttttcaaacattgaaaaaaggtacagaaacaccgaaatctgaaaat
gaggaacagcctgagcaggacaacaaaatgaattacgtacagcaacaaaaagaagctcaa
gcactatttgaaaaacgcaaagaactggcattgaattactcaacagcatataacgaccat
aaagagaaatatgtagaagatggtgaactttacaaaatccacataaaagccaaacaacaa
gcgttaaaagcattcagcgactttgggaaagacatttcttcggtagctattgaaaactat
tgggaaaataaagacgctcttgagcaagaacttgagcaattgtttgatcaagtgaaagaa
aacaacgttaaaaataagaaaaacattgaaaggagtctcaacccattttatgaggaatta
tcagcagactacttgcgtacaatgaacaaggcatctagaaatgcaagtgatgcaactttg
ggaaccttacatgaagtgcttgtgtcttctataaatgaggagttaaatgttgaaatcccg
tacgaaaacattcaacaaattgcgattgcaacttgtgagggaatgttgagagaacagcaa
gatgaagtgaacaatggaagaaacatctggaaagaattaatggaccaagccggtgcttct
actgttggtttaagcgttgcaaagacaggatcaaaagatggaagagattcagttgcaatt
gaaagcattcttgcaaacttcaacgtaaatatttctcaacttgcttctatccaattcttg
aaatctataaaattttaa
DBGET
integrated database retrieval system
