Ciona intestinalis (yellow sea squirt): 100184086
Help
Entry
100184086 CDS
T01056
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184086
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100184086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ
C2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100184086
NCBI-ProteinID:
XP_009861411
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MNQNNDVDLNGTFKRSLSVPAAVRRKNNKTMLTCTPGGGNVVNGNARLNRICDRHVVSGK
KRDIRVSRFDPAGIDLPFELLKKINDAGSHSEVGKSNIRNGSAHDPLKPMTSNDKVERRK
ETRIVRKLISVRRMASFTNRSPKNCCIKTVEIKKEQSETLGIFIKKRKISRGTDLSVLPD
GTRCKEGIFISRLEPKCKAAVLGLVNPGDQLLAINTVEVSHLSVQMVAAIMAIVQHMSLT
IRTPHSNENGRTSSNHVAVTPVENSVKSTNKPRMDVLPEDIVVESNGIKIDRNSNLSRVK
VNNSAVKSVYDNTVQNTTMNETHTEAPKIPPKESKRTASPKVNSESKLNEKFDESFQILL
EAIACLDKPNNTNNNSSLKTPPLPPKLNPKTKPQETTNENGQRSLLEEILSTVKSNSEEG
RQWTSYVSSQNEEDHALDLGMADTVSLHEPDYDEVADSDDESSLSSSGVEEEVSVDAYSQ
PLRDASGSSSSSVNSSLNAESAEILLNHQNTARRSHSIDGANLSELNHRNNINHQDPASG
KYNIPPFPTPNFDRTSDTQPKNTPSVTVDKRREWLNRGTKVSQELQSRLDGTSQPTNNLT
KRKNSLDLNLENQKPSNQKWFPRSTSKRTTSESSSGSNSNASNSPNTNRTDRKNSLKGIL
KGSSEKNESLTKMQKSPSEKSAKRLLSVNSPSSPLHSKTKFFPTPEQSSDVKESKDMKEL
STDTTSKELSPEWKDKKESVNHNKNEASGSKVTSPGRMRKKNWGMKIMKQFKMIRSSDNA
SEYRCWVGDEQFDEQFGRGVNPLIRNVTQHNIHKNIDSNDSAILNRYHLDMSMAQQRRLS
RQLLLDNTNTDPSIKPLNLSQFQKYKPLPMVNTQLSTAVDGCLVLTLYGVRELKKTLCEA
YCLVQVDDAKTKRIGTTMQTCRGAVAWNQCFEMTVNQARELHLVLYTWEMRGGKQKVCSH
ATLNLAHLMHGKRPRDMFSERLAVRLEPRGTLYIKIGLEHNSSSTGPLVFGADLQSIVDR
ENKSLGIPSLVNSCIHEVEERGMQVVGVYRLCGSAIVKKNLRSELEASKNEVKLTAEQYP
DVNVITGILKDFLRELPQPLFPPELLEAVTTAMENNPGPTPVPAVKEPFAPNPSLISGVE
LPLVVEEASEEQKLRTDALLKHIHGLSTAPAEQATLYALLNHLKRVSMHAHQNKMTCQNL
AVCFGPVLLGPVNVGPTKGYLNSIDLSAAIGFKRHIQVLNYMLSNWPDTPVLPPSDINAG
DNKRASQRMSCVSLTRRLSRVSVMEEDGGEDETIRASNDRATLVSLGRSESLNSILETED
NFTDPNMDYASNASNGFADFAASLV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaataatgacgttgatttgaacggaacttttaaacgttcgctgtccgtgcca
gcagctgtgcgacggaaaaacaacaaaactatgctcacttgcacccctggtggtgggaat
gtggtgaacggaaacgctcgactgaatcgaatttgcgaccgccatgttgtttcagggaaa
aagcgagacattcgagttagccggttcgatcccgccggcattgatcttccttttgaactc
cttaagaagataaacgatgcgggaagtcattctgaggtggggaagagtaacatccggaac
ggatctgctcacgatcccttgaaaccgatgacctccaatgataaagtggagcgaaggaaa
gagacgaggatcgtacggaagttgataagtgtccggaggatggcgagcttcacaaaccgc
agtcccaaaaactgttgcattaaaactgtcgagatcaagaaagagcaaagcgaaacactc
ggtatttttattaaaaaacggaaaatttcaagagggacagatttgtctgtgcttcctgat
ggtactcgatgcaaagagggaatatttatcagtagattggaacccaaatgtaaagctgca
gtgctgggtctagttaaccctggtgatcaactgttggctattaacacagttgaagtcagc
catctaagtgtgcagatggttgctgcaataatggccattgttcagcacatgtcactcaca
attagaacgccgcattcgaacgaaaacggtcgcaccagctctaaccatgttgctgttacg
cctgtcgagaattctgttaaaagtacaaacaaaccaaggatggatgttttacctgaggac
atagtggtggaaagcaacggcattaaaatcgatcgcaatagtaatttgagtcgcgttaag
gtaaataactcagcggtaaaaagtgtttatgacaacacagtgcaaaatacaactatgaac
gaaacacatacagaagcgccgaaaattccaccaaaagaatcaaaaagaacagcttcccca
aaagttaacagcgagtcgaaattgaatgaaaaattcgacgaatcctttcagattttactt
gaggcaatagcttgccttgataaaccaaataatacaaacaacaacagcagcttaaagaca
ccgcccctaccaccaaagttgaatcctaaaactaaaccacaagaaacaacgaatgaaaac
gggcagcgtagtttactggaagaaatattatcgacagttaagagcaatagtgaggaggga
agacagtggacttcctatgtttcctctcaaaatgaggaagaccacgctcttgatttgggg
atggcagatacagtttcgttgcacgaaccagattatgacgaagtagcagattctgatgat
gagtcatctttatcctccagtggcgttgaagaagaagtaagcgtggatgcttattcccaa
cctctacgagatgcatcgggctcttcgtcatcttccgtgaactcatccctaaatgctgag
tcagcagaaatattgctgaatcatcaaaacacagctcgacgatcgcattcgatcgacggc
gcaaatctctctgagttgaatcatagaaataatattaaccaccaagacccagcctcaggg
aaatataacatcccacctttccccactcctaactttgatagaaccagcgacactcaacca
aagaacacacccagtgttactgtggataagagaagggaatggctgaatagaggaaccaaa
gtctcgcaagaattacaaagcaggttagacggaacatcccaaccaactaacaatttaacg
aagagaaaaaacagtttggatttaaacttggaaaaccaaaagccatcaaatcagaaatgg
tttccccgaagcacgagcaagcgaacgacctccgaatcctcgagtggaagcaatagtaat
gcatcaaactcgcccaacacaaatagaacggaccgtaaaaactctcttaaaggaatttta
aaagggagctcggaaaagaacgaaagtttaacaaagatgcaaaaaagtccaagtgaaaaa
tctgcaaaacgacttctgtcagttaattcaccatctagcccacttcatagcaaaaccaag
ttttttccaactcctgagcaaagttctgacgtgaaagagagtaaggatatgaaggaatta
tcgactgataccacaagcaaggaattaagccctgaatggaaggataaaaaagagtcggta
aatcataacaaaaacgaggcgagtggaagtaaagtgacgtcgcccggccggatgaggaag
aaaaactgggggatgaagataatgaagcagtttaagatgattcgaagttcagacaacgcg
agtgaataccgttgttgggttggtgacgaacaatttgacgaacagtttggtcgtggagta
aacccactcatccgtaacgtgactcagcataatatacataagaatattgacagcaatgac
tcagcgattcttaacagatatcatctcgacatgagcatggcacaacagcgccgcttaagt
cggcaactcctactcgacaacaccaacacagacccgtcaatcaaacctctaaatttatcg
cagttccaaaaatacaaaccactgcccatggttaacactcagttatctactgcagttgac
ggttgtctagtattaacattgtacggtgtgcgggagttaaagaagacattatgtgaagct
tactgtttggtgcaagtagatgatgcaaagactaaacggatcggaacaaccatgcaaact
tgcaggggggctgtggcgtggaatcaatgttttgagatgacggtgaaccaagctcgtgag
ctccacctagtgttatacacatgggagatgagaggaggcaaacagaaggtgtgttcgcac
gccacgttgaacctggcacacctcatgcacggcaagcgaccgagagacatgttctccgag
aggctcgcagtgaggctggagccgagggggacgctttatattaagattgggttggaacac
aactcatctagcactggccctctagtgttcggagccgatctccaaagcatcgttgatcga
gaaaataaaagtcttggaattccttcgttggtgaactcgtgtattcatgaggtggaagaa
cgtgggatgcaggtggttggtgtatacagactgtgtggatcagccattgtgaagaagaat
ctacgaagcgaactcgaggcctccaagaatgaagtgaagctcactgctgaacaatatcct
gatgttaacgttataactggtatattaaaagacttcttgcgcgaattgccacaacctctt
ttcccacctgagttactagaagcagtgacaacagccatggagaataatccaggtcccaca
cccgtcccagcagtcaaggaaccgttcgccccgaacccttcgttaatttccggtgtagag
cttcctctcgtggtagaagaagcgagcgaggaacaaaagcttcggacggacgcgctactc
aaacatatacatggtctctctactgcccccgcggagcaagcgacgttatacgcgctgttg
aatcacctcaaacgagtttcaatgcacgcgcaccagaataaaatgacgtgtcagaacctc
gccgtgtgttttggccccgtgttgcttggccccgtcaatgtgggacctactaaaggatac
ctcaacagtattgacttatcagcagccattggtttcaaacgtcacatacaagtgttgaac
tatatgctgtctaactggcctgacacccctgtactgccaccaagtgatattaacgcaggt
gacaacaagcgtgcatcccagcgcatgagttgcgtcagtttaactcgtagattgagtagg
gtctcggtgatggaggaagatgggggggaagatgagacgatcagggcgtcaaatgatcga
gctacactcgttagtttaggaagaagtgaatctttgaacagcatacttgagactgaggac
aactttactgatccaaacatggattatgcaagtaatgcaagtaatggctttgcagatttt
gcagcaagtttggtgtga
DBGET
integrated database retrieval system
