Ciona intestinalis (yellow sea squirt): 100184119
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Entry
100184119 CDS
T01056
Name
(RefSeq) PAX-interacting protein 1-like isoform X2
KO
K14972
PAX-interacting protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100184119
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
100184119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
zf-RING_5
BRCT_3
Motif
Other DBs
NCBI-GeneID:
100184119
NCBI-ProteinID:
XP_018673417
LinkDB
All DBs
Position
3:complement(2533525..2564144)
Genome browser
AA seq
961 aa
AA seq
DB search
MEAAESNDDVDLFKNIRYYVVGELPQSTKDILSKAKSESYLSALATHVLVTNPDHYEVEA
ARDIWQIPTVTPRWVELSHKCNTLLPTNGFSPSVNQLFIGFVFTFSNLVKADKASLWSMV
TYHGGKCQTKLDKHCTHLVTAEPSGAKYTQSLKHENISIVAPDWITDCIKLNTKCDPAFY
HPKLNTVATVKQVPESEVTKVAAKTKAIKLTTPTAETPSRIQHPTPPATQQKQVPIQEQV
MTAPHSSNRSPMNINNPKVKAMEMQNQQQIKTEHQTNLHMQPGANQPRFPMQNHQIPPSM
VPAHNMMPSTHNYNMMNAQNFGMVNQQQQQQQQMMMSPGDPMMAMNHQQFMMMSPHVRPT
TPSPRRGSTGGKKKKNVPQQVARPTTPHNIRPPQHFPQNQLMFSHQMHLQNRMPGSVDHQ
AMMQSSDAKQNLQQPGAGIPGRHLNPVAMQQGENFQLMQMQQQQQQQQQQMRMNLMHQTS
PRPHVNTMDQKWPRTSMDQGFVPGHHQQMFPNPQQQSPNLVYSQNQMIRQPNPTVMNTQP
NQISHQQQQYNSMMMNRQVNPQQMMYQQRSPNTMNANRFPTSTSLEAAGMSGISPIALQE
GLMKAAQTRPDQPALIHPSLQGTLFPKVPPAGQNTPGTATKKRGKSRKKIDGGEEEVKPR
SRQRTTKAKKGQTIQTPMTPTNMMQTSPGAQFTNMPQFPYQMPGQAVPPTSPGRAPHTPH
QAMMSHMAVHPGNFPTTPHPPHLQSPTMHQYPRKPNPPMMATSNIPPEAHQWPPQQFLNT
NNNPESPKVASLSQTPMVDPQPQANKMEFPAKIAEEPIVPARRPCIDPLACQIKELDTRY
MCRDPAVKVTPELCLLGCVFYIFEYDEVLTDLSVIDTWKKMIGKYGGVVENTYTSSCTHV
ICLTCTTALFRQALMEGKRCVTIYWLNDVLQIRNLRVPWLALHLPTHFSHKSKPATNHVC
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagctgaaagtaatgatgatgttgatttgtttaaaaatatacgatattacgtt
gttggcgagctaccacaatcgacgaaggacattttatctaaagcgaaatcagaatcctac
ttatcagcattagcaactcatgtattggtgacgaatcccgatcattatgaagtggaagct
gcacgagatatttggcaaattcccactgtaactccacgttgggtggagctaagtcacaag
tgcaatacattgttaccaactaacggtttctcaccaagtgtaaaccaactcttcatcggt
tttgtttttacattttccaaccttgtaaaagcagataaagcttcattatggagtatggta
acataccatggtggaaagtgtcaaacaaagcttgacaaacattgtacgcacctcgtcaca
gctgaaccatctggggcaaaatacacacaatccctgaagcatgaaaatatatcaattgta
gctccagactggatcacagattgtatcaagttaaacacaaaatgtgacccagcattttac
catcctaagctaaacacagttgcaacagtaaagcaagtgccagaatctgaagtcaccaaa
gttgctgcgaaaaccaaagcaataaaactaacaactcctactgcagaaactccttcaaga
attcaacacccaacaccacctgcaacccagcaaaagcaagttccaattcaagaacaagtg
atgacagctcctcattcaagtaaccgatcaccaatgaatatcaacaaccctaaagtgaag
gccatggaaatgcaaaaccagcaacagatcaaaacagaacaccaaacaaacctgcatatg
caacctggagccaaccaaccaaggttcccgatgcaaaaccaccaaatcccgccatctatg
gtccccgcacacaacatgatgccttcaacacataactacaacatgatgaatgctcagaac
tttggaatggtcaatcaacaacaacaacaacaacaacaaatgatgatgagtcctggtgat
ccaatgatggcgatgaatcatcaacagttcatgatgatgtcccctcacgtgagaccaacc
accccaagcccacgacgtggttcgaccggtggtaaaaagaagaagaatgttccgcaacaa
gtggctcggcccaccaccccacacaacatacgaccccctcaacatttcccacagaaccaa
ctcatgttttcgcatcagatgcatctacagaatcgaatgccgggcagtgttgaccaccaa
gcgatgatgcagagcagtgatgccaaacaaaatctgcaacaacctggtgctggtatccca
ggaaggcatctaaaccccgtggcaatgcaacaaggggagaactttcaacttatgcagatg
cagcaacagcaacaacaacaacaacaacaaatgagaatgaacttaatgcaccagacttcc
cctcgaccccatgttaacaccatggaccaaaaatggccacgtacgagcatggatcagggc
tttgtacccggccaccaccaacagatgttccccaacccacaacaacaatcaccaaacctt
gtttactcgcaaaaccaaatgatccggcaaccaaacccaactgtaatgaacactcaacca
aaccaaatttctcaccagcaacagcaatacaacagcatgatgatgaatagacaggtgaac
ccacagcaaatgatgtaccagcagaggtcgccaaacacaatgaacgcgaatcgcttcccg
acctccacctcgctcgaggcagcgggcatgtccgggatctccccgatagctctgcaggaa
ggtttaatgaaagcagcgcaaacacgtcccgaccaacctgccctcatccatcctagtttg
cagggaactttattccccaaagttccgcctgcaggacaaaacacaccaggaacagccacc
aaaaaacgaggaaaatcgaggaaaaaaattgatggaggggaagaagaagtgaagccgagg
tctcgacagagaacgacgaaagctaagaaagggcaaaccatccaaacaccaatgacacca
accaatatgatgcaaacctcacctggtgctcagtttacaaacatgccacaattcccatac
cagatgcctggtcaagcagtacctccaacttcacccggccgcgccccccacactccccac
caagcgatgatgtcacatatggcggttcacccagggaacttccccaccacccctcacccc
cctcatctacaatcccccacaatgcatcagtatccacggaaacccaatccccccatgatg
gcgacatccaacattccccccgaagctcatcaatggccgcctcaacagttccttaacacg
aacaacaaccctgaaagtcccaaagttgcatctttgtctcaaacgccaatggttgatcct
cagccacaagccaacaaaatggaatttccagctaaaattgctgaagaaccaatagtacca
gcaagacgaccgtgtattgacccactggcttgccaaataaaggagttagacacacgctac
atgtgcagggacccagctgtcaaagtgacgcccgagttgtgtcttcttggttgtgtgttt
tatattttcgagtacgatgaagttttgacagacttgtcggtcatcgatacgtggaagaag
atgattggaaaatatggtggagttgtagagaacacttacacctcatcatgtactcatgtt
atttgtctcacatgcacaacagctttgttcagacaagccctgatggaggggaagaggtgt
gtgacaatatattggttgaatgacgttctacagattcgtaatttacgagttccatggtta
gcccttcaccttccaactcatttttcacataaatccaaacctgctacaaaccatgtatgt
ttttaa
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