Ciona intestinalis (yellow sea squirt): 100184248
Help
Entry
100184248 CDS
T01056
Name
(RefSeq) conserved oligomeric Golgi complex subunit 2-like isoform X2
KO
K20289
conserved oligomeric Golgi complex subunit 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184248
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
100184248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG2_C
COG2_N
VPS51_Exo84_N
DUF7708
TraC
Motif
Other DBs
NCBI-GeneID:
100184248
NCBI-ProteinID:
XP_002132051
Ensembl:
ENSCING00000018040
ENSCING00000018855
ENSCING00000024378
LinkDB
All DBs
Position
11:3693267..3711018
Genome browser
AA seq
705 aa
AA seq
DB search
MTESTEMEKSKRPKVSLLPIAPSTLCFDKNEFMKADFSVDHFVADCRRRVQLETLRQDLE
IYFKVLKNAMIELINKDYADFVNLSSNLVGMNKAIELLREPLSKIKVDVGEVVEVMKNKV
EEVERSLGHQKMVGEKRILLSHMKGLLQAVEKIEHIQRSDDSNTGQVLERIAGEFNQLQH
HATFCKGLPVLNHIRPRISDITSNLQNGLEGELVQGIASSDLRSIHRCLNSYALIGKTKD
AESLVRAHVVQPCLHQVIVEHNGDSGINNLKYLFNKILESVPAQLKLLCDITSGRQLQLG
DQFRGIPGYDFMINSAWPEVVSSLETNLPGIFASGDPDMFHKRYKLCMEFICNFERHCGS
QASIIKLRQSDSYNVLMTHWSLPVYFQIRFQEIGGNFESVLSNTEQALLSEEGKTFRLKS
TSVLWDCIRRCWNIDVFLPSLMHRFWKLTLQLLARYKTWIQKIQREQIANDSQFPLGKVA
EIALDIEALVDHVNTFYLDEIQPKATKQGLKDVDILQRALNDIFSELKTHKDDLINHIVT
SLSSQSIVFLKQAQDVPRLFRKTNRPTPTEQSTYVTNLMKPIVAFHGGQTSYINDELLSH
WLTQVAIPISDRFHSVVSEVLTSVRKMEESLLRLQKMRSGGKSSSSNLAALAGSSLSDDD
KIRLQLFIDVTSFGKQMSACGGKMDTIPVYQKLFQLVEEAKKNPS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtcgacagagatggaaaaatcaaagcgcccgaaagtttctttgcttccaatt
gcaccttctactttatgttttgataaaaatgagtttatgaaagcagatttcagtgttgac
cactttgttgctgattgtagaagacgagttcaactggaaacactgcggcaagaccttgag
atttattttaaagttcttaaaaatgcaatgattgaactgatcaacaaagattatgctgac
tttgttaatttatcttcaaatctggttggaatgaataaagcgattgaacttttaagggaa
ccgttgtcgaaaatcaaagttgacgtaggggaggttgttgaagtgatgaagaataaagtg
gaggaggttgaaagatcacttggccatcagaagatggtgggagagaaacggattcttctt
tctcatatgaagggcttgttgcaagcggtggaaaagattgaacatattcagagatcggat
gattcaaacaccggacaggttcttgaacgtatcgccggtgaattcaaccagcttcaacat
catgccacgttttgtaaaggtttacctgttcttaatcatataaggccgcgaatatcagac
attaccagcaatttacaaaatggtttggaaggagaattggtgcagggtattgcttctagt
gatctacgcagcatacatcgctgtttaaactcatatgcattgattgggaaaacaaaggat
gcagaaagtttagttcgggcccatgttgttcaaccatgtctacaccaggttatagttgaa
cacaatggagatagcggaataaacaacttgaaatatttattcaacaaaatattagaatcg
gttcctgctcaattgaaactactttgtgacatcacatcaggaagacaattacaacttgga
gatcagtttaggggaatcccgggttatgacttcatgatcaactcggcgtggcctgaagtt
gtctcttcattggagactaatctccctggaatatttgcatctggtgatcctgacatgttc
cacaagagatacaagctatgtatggaatttatttgtaactttgaaaggcactgcggctct
caagcgtcaatcatcaaacttcgtcaaagtgattcttacaatgttctcatgacgcactgg
agtttgcctgtctacttccaaattagatttcaggaaattggaggaaactttgagtctgtg
ttgtctaatactgaacaagcattactcagtgaagaaggaaaaacattcagactgaagtcc
acttctgtgttatgggattgcataagaaggtgttggaatatcgatgtttttctaccaagt
ctaatgcacaggttctggaaactcacactgcagttgttagcaaggtataaaacatggata
caaaagattcagagggaacagattgccaatgattctcagtttcctttgggtaaagtagct
gaaatcgctttggacatcgaagcacttgtggatcatgtaaacactttctatcttgatgaa
attcaacccaaagccacaaaacaagggttgaaagatgttgacattttacaaagagcactg
aatgatattttctctgaattgaaaacacacaaagatgatctaataaaccacattgtgaca
tcactatcctcacagtctattgtgttcttaaaacaagctcaagacgtaccaagacttttt
agaaaaacaaacagaccaactccaacagagcagtcaacatacgttacaaacctaatgaaa
ccaattgttgctttccatggtgggcaaacatcttatataaatgatgagttactctcacat
tggttgacgcaggtggcaataccaatatcggacagatttcacagcgttgtgtccgaggtc
ctcacttctgtgaggaagatggaagagagcttgctccgattgcagaagatgaggtctgga
ggaaaatcttcttccagtaaccttgcagcattggcgggatcctctttatcagatgatgat
aaaatacgacttcagttgtttattgacgtcaccagttttggaaagcagatgtcagcttgt
ggtgggaaaatggacacaataccagtgtaccagaaactattccagttggttgaagaagcc
aagaagaaccctagttga
DBGET
integrated database retrieval system
