Ciona intestinalis (yellow sea squirt): 100184290
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Entry
100184290 CDS
T01056
Name
(RefSeq) peripheral-type benzodiazepine receptor-associated protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_2
SH3_9
SH3_1
RIMB1_N
fn3
ACBP4_C
FlxA
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
100184290
NCBI-ProteinID:
XP_009858695
Ensembl:
ENSCING00000023167
LinkDB
All DBs
Position
5
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AA seq
1545 aa
AA seq
DB search
MDSGLVPISPNRADMGDLAQLSEDMKLHIAQLKAQINSGDSDLKTEIEDQTEPPSSSNLL
PPSPHTSLMDAGDAPEDPPPDAGELEQDPKPPEPEPHTSVKTNPVPKKRKKVKRSSLHSQ
SSSTPPRSITEGTEEAIPVKYLQMSSKSPRSKQTNNKQILNKKPDGICSSDIDSAAISAN
QPTPRSIDSRTSFGMSQYSDFQPPRTDRQLKYEERIIDLKKKNTELVAIARRLEEKAKSL
QEQNVKKSQDLRSVNQDLQQQKRSHQRHRVRCETEHSRALNECETQLRTAQAQLADLKLA
MKQTRREKLVKNAGNDSGDENIMVQKQLEMMKLQKLAAAASNKVVIRSLSTPVTARQKIL
ETSNRNLRRQISSLEAELQNLQQKSEDHSGNEELKEENRAFQEQISALESQLGESKIETS
DISVQYQELKHLHEQLQWEYNTVHGQLAVAIQERDKAVQQCREFSSTITDMETTIKNFDK
TRESFKSLQSQHMESQQHHLVEVRNLKSEHDSVVADYQQTLQHLQSKVNELEAQCREQDM
NNKNMKQQISQLIQWSREKDSHSPNANRAENRNNNNMIQHPVHRRTPSQDSRASDSVASH
HSHQDLAQGKLRMVPQVTTTDDTEIEDFYEDEILPQSCDKVHRSEMIASGSLKVFIAKYT
YNPQEGPNEHPEAELPLVAGDYVYVCGEIDEDGFFEGELMSGQRGLVPSNFLEPVPDDRL
LPHCDARMLSSGHSNDKHRSVESELSHSYCSSVTTNSCDLESSDVTDCHSINSSVLPYPR
KLRVDKKLSHSLIIGWVVPKLDNDEIVEDYHILVDGRLATVVSGNKSKAVVENIYYNKQK
YCISVCAVTGHRRSDPMHCFLYYGHGSAHNKINNVRVDYLGTSSARLSWTPTRSNVQHVI
SIGQVTSSVTRLSQYQRQIIVTPPLYEHTIHGLKIGAMYEVVVSMKTNKQSDEAAGSDPI
RFTTNTVEPPSAPSSVKISLKSESIIEVSWTSDDFDDISNYFVFMNGIKIAESANDYCEI
SMKSVFRILPQIGYDVNRIRSPSYSPFIEITLQGKSSSGVFSDISEPTIFPESFIEKLLQ
LPLVTGTSPKTRRKTKRELYDEPPHPVVPSIEITHDTSSDDENNHRRRFREKESAKKSSQ
NREIPSDPRSATIDPSFFSRESPAVSRLARRRVHSDDDSCSSSSTSSLNRRQPVEGWEKR
PTFQVGGRTVKSHQPRSEDKFSDKDSASNLSPVSRRTRSVQDKRLVQSSTLSSQSGPDSI
TELDISDSRVSLYVALYDYNPYTMSPNQDCLQDELSFTEGQLIKVYGEKDADGFYMGEKH
NGKRGYVPCNMVSEVQVDDYTMLEELFDRGHLPSVSSDHRTSSHNDQLSDHNGSADLLTQ
DGAPELSSELLPVAPPNSDVKLYVALFDYDPKESSPNIDAEAELSFASGDLIHVHGVMDE
DGFFRGERNGCFGLVPSNFLEEVTENTGSNHLKPEMNGYSAPVPTISAETMTEATVINNP
PKVEPSSVTSTSSTTSSVKSDGSKRKGIFSKGKQLLKKFGDKNKR
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcttggtgcctatatcgccgaatagggcagacatgggcgaccttgcgcag
ctaagtgaagatatgaaactgcacattgcgcaactaaaagcacagattaactctggggac
tcagatttgaaaactgagattgaagaccaaactgaacctccatcttcctccaatcttcta
cctccttctcctcacacctcactcatggatgcgggtgatgctcctgaggatcctccccct
gatgcaggagaattagagcaggatccgaaacctcctgagccggaacctcacaccagtgtg
aagacaaatcctgttcccaagaaaagaaagaaagttaaacggagcagtttacatagtcaa
tcttcaagcactcctcccagatcgatcactgaaggaacggaggaagcgatcccagtcaaa
tatctccagatgtcgagcaagtctcctcgatcgaaacaaacaaacaacaaacaaattctt
aacaagaagccagacggcatctgcagcagtgacattgattctgcagccataagtgccaac
caaccaacaccaagaagcattgattcaagaacttcatttggaatgagccagtacagtgat
tttcaaccaccacgtacggatcgtcagttaaaatacgaggagaggataatcgatctgaag
aagaagaacacggaacttgtagcgattgcgagaagattggaggaaaaagcaaaatccctg
caagagcaaaatgttaagaaatcgcaagatttacgatccgtcaaccaagacctacagcag
caaaaaagatctcaccagcgccaccgtgtgcggtgtgaaactgaacactcaagagcactt
aacgagtgtgagacgcaactacgaactgcccaagcccagctggctgatcttaagcttgcc
atgaaacaaacacggagagaaaaacttgttaaaaatgcaggcaacgatagtggagatgaa
aatataatggttcaaaaacaactggagatgatgaaactgcagaagctggcagctgctgca
agtaataaggttgtgattcgatccctgtctactccggtcaccgctcgtcagaagatctta
gaaacctcgaaccggaatctccgtcgacaaatttcttccttggaggcggagttacaaaat
ctccagcagaagtccgaagatcattctggaaacgaggagttaaaagaagaaaacagagct
tttcaagaacaaatatcagctttggaatctcaacttggagaatcaaagattgaaacgagc
gacatcagtgttcaataccaggagcttaaacatctgcatgaacagttacagtgggagtat
aatacagtacatggacaactagctgttgcaattcaagagcgagataaagcagttcaacag
tgcagagaattctcttctaccattactgatatggagacaacaataaaaaattttgacaaa
actcgagaatcgtttaaatctctgcaatcacaacacatggaatctcaacagcatcaccta
gtggaagttcgtaatttaaagtccgagcatgattctgtcgtagcagactaccaacaaact
ttacaacatttacagtccaaagtgaatgagttggaagctcaatgcagagaacaagacatg
aataataagaacatgaagcaacaaatatctcaacttatccagtggtcacgtgaaaaagat
tctcactcccctaatgctaatcgtgcagaaaaccgaaacaacaacaacatgatccagcac
cccgtgcaccgtcgcacgccctcgcaagatagccgagcatccgacagtgtcgcgtcacat
cacagtcatcaagatttggcacaaggaaaactcaggatggtaccacaagttactacgaca
gacgacacagagattgaagatttctatgaagatgagattttgccacaaagctgtgacaaa
gtgcatcgcagtgaaatgatcgctagcggaagtttgaaagtttttatagcaaaatacaca
tataatccacaagaggggcccaacgagcacccggaggcagagctcccacttgtggcgggg
gattacgtctatgtgtgcggggaaattgacgaagatggattttttgaaggtgaattaatg
agtggacaacgtggcctcgtaccttcaaactttcttgaacctgttccggatgatcggtta
ttacctcattgtgatgcaagaatgctcagttcaggacattcaaatgataaacacagatct
gttgaatcagagttgagccacagttactgcagtagtgtgacaaccaatagttgtgatctt
gaatcaagtgatgtcactgactgccattccattaactcgagtgtactcccttacccacga
aaattacgagttgacaagaaattatctcacagtcttattataggttgggttgtcccgaaa
cttgacaatgatgaaatagtagaggattatcatatactggtggatggaaggttggctact
gtggttagtgggaacaagagcaaagcagtggtggagaacatttattataacaagcaaaaa
tactgcataagtgtttgtgcggtcacgggtcaccgacgatctgaccccatgcattgtttc
ctatattatggacacggttcagcgcataacaagatcaataatgtccgagtcgactatcta
gggacatctagtgctcgtttgtcatggaccccgacgcgcagcaacgtacaacatgttatt
tctattggacaagtaacaagcagtgttaccagattaagccaataccagcgtcagataatc
gttacccctccattatacgaacacaccatacatggattgaagatcggtgctatgtatgaa
gttgttgtgagtatgaaaactaataaacaatcggatgaagctgcaggctctgatcctatc
agatttactaccaacactgtggaacccccaagtgcaccatcaagtgttaaaatatcgctc
aagtccgagagtattatcgaagtatcatggacttctgatgattttgatgacatcagcaat
tattttgtgttcatgaatggaatcaaaattgctgagtcagcgaatgattattgtgagata
tctatgaaaagtgtgtttagaattctcccgcaaattgggtacgatgtgaaccgcatacgc
tcgccaagctattctccattcatagaaataacattacaaggaaagtcatcaagtggcgtt
ttctctgatatttccgaacccacaattttcccagaaagtttcatcgaaaagctcctccag
ctgcctctggtgacaggaacctccccaaaaactcgcagaaagacgaaacgcgaactttac
gacgaacccccccacccggtggtgccttctatagaaataacgcatgacacgagcagcgat
gatgaaaacaaccacaggaggcgctttcgagagaaagaatcagcgaaaaaatcgtcacaa
aatcgagaaatcccttccgacccacgttcagctactattgacccctcgtttttttcccga
gaatccccggcagtgagccgccttgcacgccgacgtgtccactctgacgacgactcgtgc
tcttcatcctcaacgagctcgcttaaccgtagacagccggtggaaggttgggagaaacga
cccacattccaagttggggggaggacggtgaaaagtcaccaacccagaagcgaggacaaa
ttttcagacaaagactctgcaagtaatttaagcccagtatctcgccgaacgaggtcagtg
caggataaacgactcgtacaaagtagcacacttagtagtcaaagtggaccagattctatt
actgagcttgatatttctgactctcgtgtcagtctgtatgtggcactgtatgactacaac
ccctacaccatgtcaccaaaccaagactgcttacaagatgagttatctttcaccgaagga
caactaatcaaggtttacggtgaaaaagacgctgatgggttttatatgggcgaaaaacat
aatggtaaacgtgggtatgtcccgtgtaacatggtatcagaagttcaggttgatgactac
acgatgttggaagagttatttgatcgaggacatcttccatctgtgtcctctgatcatcgt
acatcaagtcataatgatcagttgtcagatcacaatggatcagcggatctcctcacacaa
gatggtgcccctgagctgagttcagagttgctccctgtagcgccacctaacagtgatgtg
aaattatacgtggctctcttcgactacgatccgaaagagtcctcgccaaatattgatgcg
gaagcagaactttcgttcgcgagcggcgacctcatccatgttcatggggtcatggatgaa
gacgggtttttcaggggtgagagaaatggttgctttgggttggttccctctaactttctt
gaagaagtgactgagaatacgggatctaaccacctcaaaccggagatgaatggatacagc
gcaccagtgcccactatatctgctgaaaccatgacagaggcaaccgttatcaacaatcca
ccaaaagttgaaccatctagtgttacttcaaccagtagtactacaagttctgttaagtca
gatggtagcaaacgcaaaggaattttctccaaaggaaaacagctgctaaaaaaatttggt
gacaaaaacaagaggtag
DBGET
integrated database retrieval system
