Ciona intestinalis (yellow sea squirt): 100184350
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Entry
100184350 CDS
T01056
Name
(RefSeq) serine palmitoyltransferase 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
Module
cin_M00094
Ceramide biosynthesis
cin_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100184350
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100184350
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
100184350
Amino acid related enzymes [BR:
cin01007
]
Aminotransferase (transaminase)
Class II
100184350
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
100184350
NCBI-ProteinID:
XP_002132110
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Position
5:complement(1408811..1413695)
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AA seq
476 aa
AA seq
DB search
MESASEWVVAQSIHSLLQAPLYHYIVEGLLVVWIIRLLFFKSYKIHDKVPLTTKEKDELI
EDWEPEPLVPPLEETRAVSKPYRVVSGQPGKEIVVDGYKCKNFASLNFLGFVENERISKA
ATECVSKYGVGSCGPRGFYGSFDVHLELEKRIAKFTGTECAIIYSYGFATIASAIPSYSK
RGDILYVDEACCFAIQKGVQASRSNVVYFKHNDMEDLESKLRHQEMLDKKDVKKSSVTRK
FMVVEGIYMNTGEICDLPRLVDLKYKYKVRLFVEESLSFGVLGQHGRGVTEHYNIPVEKV
DMMCGSMEYSLASTGGFCCGREYVIDHQRLTGLGYVFSASLPPLLACAAIEAIDIMEEEH
EVLFPKLKSKAVLLQQLVRKIPYIEVVGYLESPAFHIRRLKKVSFEEDLKFLNDIVNKSC
ELGVCLTVASRLKQIELKEDWPPSIRVSVSVNMSDDELQNMAQVLTQAVHYANEQA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgcaagtgaatgggttgtggcacagtctatacattcattattgcaggcgcca
ctttatcattacatcgttgaagggttgttggttgtttggattattcgacttttatttttc
aaaagttacaagattcatgataaggttcctctcactactaaggagaaagacgaactgatt
gaagattgggagccggagccacttgttcctcctcttgaggaaacaagagccgtatccaaa
ccttatcgtgtcgtgtcaggacaacctggaaaagagattgtagttgatggatataaatgc
aagaattttgcttcgttgaattttcttggttttgttgaaaatgagcgaatatcaaaagct
gcaacggaatgtgtttccaaatatggggttgggtcttgtggaccaagaggtttttatgga
agctttgatgttcacttagaacttgaaaagcgaattgcaaagttcacgggcactgaatgc
gcgattatatattcatatggtttcgccaccattgctagtgctataccttcctattctaag
agaggcgatattttatatgtagatgaagcatgttgtttcgcgatacagaaaggagtccaa
gcatcaagaagtaatgttgtttacttcaaacacaatgacatggaagatttggaaagtaaa
ctgcgtcatcaggaaatgttggataaaaaagatgttaaaaaatcatcagtgactcgtaag
tttatggtggttgaaggaatctacatgaacacaggagaaatctgtgacttgcctcgactt
gttgacttaaaatataaatacaaagttcgtttgtttgttgaagagtcgctttcttttgga
gttcttggacaacatggcagaggtgtaactgaacattacaatattcctgttgagaaagtt
gacatgatgtgcggaagcatggaatattcgcttgcatcgactggtggattttgctgtgga
cgtgaatacgtgatcgaccaccagcgactcacagggttgggttacgtcttttctgcttca
cttcctccactgttggcttgtgccgccattgaagcaatcgatataatggaagaagaacat
gaagttctgtttcccaagctgaaaagtaaagcagttttgctacaacaacttgtcagaaaa
ataccttacattgaagtagttggatacttggaatctcctgccttccacataagaagattg
aagaaagtttcatttgaagaggatttgaaatttctcaatgatattgtgaacaagagttgt
gaactgggagtttgtctcactgtagcaagtcgtttgaagcaaattgaactaaaagaagat
tggccaccaagtattcgagtttctgtgtccgttaatatgagcgatgatgaattacaaaac
atggcacaagttttaacacaagctgtccactatgcaaatgaacaggcataa
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