Ciona intestinalis (yellow sea squirt): 100184375
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Entry
100184375 CDS
T01056
Name
(RefSeq) ankyrin repeat and zinc finger domain-containing protein 1-like
KO
K26089
ankyrin repeat and zinc finger domain-containing protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100184375
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100184375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bVLRF1
VATC
Ank
Ank_2
Ank_3
acVLRF1
GlfT2_domain3
Ank_5
baeRF_family10
Ank_4
Motif
Other DBs
NCBI-GeneID:
100184375
NCBI-ProteinID:
XP_002123606
LinkDB
All DBs
Position
1:6948247..6955934
Genome browser
AA seq
692 aa
AA seq
DB search
MSHLCPYKISLSESERLSELLVELKLGKRTDTETERVQDTDKVTEPPTEESTADQTLQCL
TCKCELSERENQTEHYKGEWHRYNLKLRLLGLPAIGEDEFGGMSVDDLSISGSDSDFDSS
PASRRRFSLSLCKSDAEEEDAHDEQFDNRRPKLYLQNKSGEVLSIYKKVLYSKTINNDED
VARYASSMIAQACNQTWVVILLSAGHFAAAVFEGSKVAAHKTFHRYIVRAKRGTVQSSND
AANRNSTAKSAGASLRRHNEQVLEENIKQLLLSWNEEIKNAALIFIRIPQYRKGLFYSGK
DPLFNSKDSRIRTIPFVTRRPTFNEVQRVHQELFSVAMHGKNSMPDILTPPRASKNKRIK
NPVIQPKVEEIKTLSQTGSDSDIELITTNQSVETSELKMFETKITNYGNKKKNKKKKKKK
QDNNTPTSTEKEKVEKAPAVEAKQQRFPAHIEDFLNQMFTACKTSNLNLIHELIHDFSSR
DSCDAQSSDPGNEQISHVINFTIDSQGNTLLHVAAKTGLKEIIFTLLEAGADPAIKNFTS
FLPYCLCPNKEARNIFRRFRSKYPDKFDYKSAQIPSPLSDVAEEEMKKKKSEKKKMQRLD
RKLKERVKREEEEKKKEEQDEKERFLALSDREKRLIAIERRMMNSHPSPSSNERRCFTCA
ESLFAKVPFEYLDFQFCSVICLKTHKKTKTKS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttatgtccatacaaaatatcacttagtgaaagtgaacgtctcagcgaactt
ttggtggaactaaaacttggaaaacgaacggatactgaaacagaacgagttcaggataca
gataaagttacagaaccacctactgaagagtcaactgcagatcaaacattacaatgtctg
acttgcaaatgcgagttatcggagcgagaaaatcaaaccgagcattacaaaggagaatgg
catcgttataacttaaaactgagattgttgggtttgccggccattggtgaggatgagttt
ggtggaatgtcagttgatgatttgagcatctctggctctgactctgacttcgattctagt
cctgcatccagaagaagattctcgttatctttgtgtaagtctgatgcagaagaagaggac
gcacatgatgagcagtttgataacaggagaccaaaactatacttacaaaataaaagtggc
gaagtgctttctatatataaaaaggtcttatatagcaagacaataaacaacgatgaagat
gtagcaaggtatgcgtcaagcatgatcgctcaagcatgcaatcaaacatgggttgtaatt
cttctcagtgcggggcattttgctgccgctgtgttcgaggggtcaaaagttgccgctcac
aaaacatttcatcgttatattgtccgcgcaaaacggggaactgttcaaagctccaatgat
gctgcgaatcgcaacagtacagctaaatcagcaggtgcaagtttgcgacgacataatgaa
caagtgttggaggaaaatatcaaacagttgctcttgtcttggaatgaagagataaagaac
gctgcgttaatatttataaggattccacaatatagaaaaggattgttctacagtggaaaa
gatcctttgtttaattcaaaagattctcgaattcgaacaattccgtttgttactcgtcgt
ccgactttcaatgaagttcaaagagttcatcaggaattgttttccgttgctatgcatggt
aagaattcaatgccagatatcttgacaccacctcgtgcatctaaaaacaagcgaattaag
aatcccgtcatacaaccgaaagttgaagaaattaaaactttatcacaaactgggagtgat
tctgacattgagctgataactacaaatcaatcagttgaaacttcagaactaaaaatgttt
gaaacaaaaatcacaaattatggaaataagaagaaaaacaaaaagaaaaagaagaaaaaa
caagataataacacacctacaagcacagaaaaagagaaagttgaaaaagcaccagctgta
gaagcaaaacaacaaagatttccagcacatattgaagatttcctcaaccagatgttcacg
gcatgcaagacttccaacttaaacctcatacatgagctaattcatgatttctcatcacga
gattcatgtgatgcacagtcatcggatcctgggaatgaacagatttctcatgtgattaat
ttcacgattgattcacagggaaacactttacttcacgttgctgcgaaaactggactcaag
gaaattatattcacactgcttgaagcaggtgctgaccctgccattaaaaacttcacatcc
ttccttccatattgtttatgtccaaataaggaagcgcgtaacattttccgtagatttcga
tcaaaatatccggacaagttcgattacaaatccgctcagattccctctcctctctcggat
gttgcagaggaagaaatgaagaaaaagaaatctgagaagaagaagatgcaaagattggat
cggaagttaaaggagcgagtaaagagagaggaagaagagaaaaagaaagaagagcaagat
gaaaaagagagatttcttgctctttcagatcgagagaagaggttgattgccatagaaaga
agaatgatgaattctcatccttctccatcttctaatgaaagacgttgcttcacttgtgca
gaaagtttgtttgcaaaagtcccgtttgaatatcttgactttcaattctgttccgtcatt
tgtttgaaaactcacaagaagacaaaaacaaaatcataa
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