Ciona intestinalis (yellow sea squirt): 100184397
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Entry
100184397 CDS
T01056
Name
(RefSeq) coiled-coil domain-containing protein 22 homolog
KO
K23343
coiled-coil domain-containing protein 22
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184397
04121 Ubiquitin system [BR:
cin04121
]
100184397
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Others
Others
100184397
Protein recycling
CCC complex
100184397
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
100184397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
Hemerythrin
DUF8778
ApbE
Motif
Other DBs
NCBI-GeneID:
100184397
NCBI-ProteinID:
XP_026693321
Ensembl:
ENSCING00000007382
ENSCING00000014426
LinkDB
All DBs
Position
14
Genome browser
AA seq
634 aa
AA seq
DB search
MEEVDQIIIGSLLNIGCEFAEGLESLKQFTTDNVVEGTVKCLRIINPDYKMSHIFPPGMS
ARFRVGTSIANACKEAGYRGDVGYQTFLYSAERDVRQIFMFLVEKLPRKEGVKEDIESAS
VLQRRIGQVLREKCAVLWMPFYCHTSPKKIPFRTQPINISKYSQGYKNSKSQDETTYDFV
HRQIKNRDQLTPSLLELNSKQTVSVTSLDKASGQDSKRRKVQKEAFQWKHKSMITDKIPL
DSSFDDVIQAVTGNSGNIKQSRFAHAKSLQFTTEEQKSFRLRPTVPQKPSHLIKHENKKK
DDAETDNQESSEDGVDGSSAGGGEDAVIPEEPEEVKFKREEEEIKVKILDADAGEEKYKE
ELKMVELSIKQLMIKTEELETNNEEEVKNVKLKEKTLKLLPNAEENMEKLKSLVDASSKR
LVELGRLWEEKRVPLIEDIRRLKQSKTESEFDAERKVEEIRMLRTRMKDVAEETKLKDQL
TKQLKAELESVKRDISRQSYTRRILEIVASIHKQKQEIQRVIQDVKQVQKTMNRLKGRAE
RTFSAADEVIFKDAKHDEGSKQAYKYLVSLHDNCATLLKTVEETGLIMREIRDFEGQIDI
ETGKNAEENLEKILKDYKEIKKENTEMIKRLKQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttgatcaaatcattattggttcgttacttaacattggatgtgaatttgct
gaaggattggaaagtttgaaacagttcactacagacaatgtagtggaagggacagtgaaa
tgtcttcgaatcataaaccctgattataagatgtcgcatatttttccaccagggatgtcg
gctcgatttcgagttggtacttctatcgccaatgcatgtaaggaagcaggttaccgtggc
gatgtcggataccagacctttctgtactcagctgagcgagatgtgcgacagatatttatg
ttcctcgtcgaaaaacttccaagaaaggaaggagttaaggaagatatagaatctgcgagt
gttctgcaaagaaggattggccaagttctacgtgagaaatgtgctgtcttgtggatgccg
ttttactgccacacctcaccaaagaaaatcccgtttcgaactcaaccaataaatatttct
aagtattcacagggatataaaaatagcaagagtcaagatgagactacatatgatttcgtt
caccggcaaataaagaatcgcgaccagctaactccttcattacttgaacttaactcaaaa
caaactgtttctgttacatctctggataaagcatcagggcaggactccaaacgacgtaaa
gttcaaaaagaagcatttcaatggaaacacaaatcaatgataacagataaaattcccctt
gattcaagttttgatgacgtcattcaagcagtgaccgggaactcaggaaatataaagcaa
tctagatttgctcacgctaaaagtttacagttcacaacagaagagcaaaaatcatttcgt
ttgaggccaacagtgccacaaaaaccaagtcatttgattaaacatgaaaataaaaagaaa
gatgatgcagaaactgataatcaggaatcatcagaagatggtgtggatgggagttctgct
ggagggggggaagatgctgtgatcccagaagagccggaggaagtgaagtttaaacgagaa
gaggaagaaataaaagtaaagatcctggatgcggatgcaggggaagagaaatataaggaa
gagctgaagatggtggagttatcaattaaacaattgatgataaaaacagaagagttagaa
acaaacaatgaggaagaagtaaagaatgtaaaactgaaagaaaaaactttaaaacttttg
ccaaatgctgaggaaaatatggaaaaactgaaaagtttggttgatgcaagttcaaagagg
ttggttgaacttgggagactttgggaggagaagagagttcctcttattgaagatataaga
agactgaagcaatctaagacagaatccgagtttgatgctgagcgtaaagtggaagaaata
cgaatgttacgaactcgaatgaaagatgtggctgaagaaaccaaactaaaagaccaactt
actaaacaactgaaagcagaactcgaatctgtaaagcgtgatatatcaaggcagtcgtac
acgcgccgtatcttagagattgtagcaagtatacataagcaaaagcaagagatacagaga
gttattcaggatgtgaaacaagtgcagaaaacaatgaatcgactgaagggaagagcggaa
agaacgttttctgcagccgacgaagttatttttaaggatgcaaagcatgatgaggggtct
aaacaagcatataaatatctggtgtcgctccatgataattgtgctacgttactaaaaact
gtggaagaaactgggctgatcatgagagagataagagattttgaaggacagattgatatt
gaaactggtaaaaatgcagaggaaaatctggagaaaattctcaaagattataaagaaatt
aagaaagagaacacagaaatgattaagagattaaaacagaagtag
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