Ciona intestinalis (yellow sea squirt): 100184429
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Entry
100184429 CDS
T01056
Name
(RefSeq) TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184429
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100184429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
100184429
NCBI-ProteinID:
XP_009861344
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MVGATHACALITKVAINAMESNGTSAVSDLSHDTKQAGVNSYVEQWNDYFEGHENLIEYL
KYKTYSHSLRRCHFRSVCWRIFLHCLPHNTSEWPAALVKSRAEYDVIKERNITIPNSEKQ
PSNIEVENPLSQNDDSTWLQYFRDKELRNDIERDVRRTFPEMDYFSKEDVRHAMENILFC
YAREHTNLSYRQGMHELLAPILFVLHCDLQGAFHTQEMGELPPIIQTVFQQKYLENDAYT
MFCQLMRSTNPWYSINEIEPELPLECAKNNDPIPTVPFQPSEENNAGPPLEITNKLNRIH
NDLLATYDHELYYHISRLEIIPQVYGLRWVRLLFGREFDLQDLLVLWDTMFADSSALDLV
DYIFVALMVNIREQLLAADYCTCMRILMKYPPIEDIFDIVHLAIYYRDPKNNRRPSHSRF
KFEPRQTEKQPVKKTKSSNGIFSGLKIDNLFSNFGNEFKRAVSTPKAAKKPTYQEFNTPV
DRPKSRSTSFEKPPSTNDELEDMREIHQDLQQKCLFCADKLEANIRLLQHHLVDKSSNEG
SVKEENGHCGVTKKKEEVFLALASLKQVRDILRGSLNLNQSANSKEITNIENLKSRLEDL
PLPPLESPKNLNNEGDLPTEATLQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgcaacgcatgcatgtgcattgatcacaaaagttgcaattaatgctatggaa
tctaacggtaccagtgcggtgtctgatttgtcccatgatacgaaacaggctggtgtgaac
agctacgttgaacaatggaacgattattttgaggggcatgaaaatttgattgaatatttg
aaatacaaaacgtactctcacagtttgagacgatgccattttcgaagtgtgtgttggagg
attttcttgcattgtttacctcacaatacaagtgaatggccagcagcattggtaaagtcc
cgtgcagagtatgatgtcataaaagagagaaatattacgattccgaattccgagaaacaa
ccctccaatattgaagtggaaaatcctttatcacaaaacgatgacagcacctggcttcaa
tattttcgagacaaagaacttcgaaacgatattgaacgagacgtaagacgaactttccca
gaaatggattacttcagtaaagaggacgtacgccacgcaatggaaaatattttattttgc
tacgcacgcgagcatactaacttgtcgtacagacaaggaatgcatgagcttctcgctcct
attctgtttgttcttcattgtgacctacaaggtgctttccatacccaagaaatgggggaa
ctcccgccgattattcaaactgttttccaacaaaagtatttggaaaatgatgcttacaca
atgttctgccaactaatgagatcaactaatccgtggtattcaatcaacgaaattgaaccg
gagttgccactagagtgtgctaagaacaatgaccccatacctacagtacccttccaacct
tctgaggagaataatgcgggaccacctttagaaataacaaacaaattgaatcgaatccat
aacgatctgcttgctacgtacgatcatgaactgtattatcatatcagcagattggagatt
attcctcaagtttatggactgcgttgggtacgattattatttggacgagaatttgacctt
caagatttgcttgtgttgtgggacaccatgtttgctgatagttctgctttagatctggtc
gattatattttcgtggcattaatggttaacataagagaacagttgttagctgctgactac
tgcacatgcatgaggatattaatgaaatatcctccaattgaagatatttttgacatcgtg
catcttgctatttattatagagaccctaagaacaatcgtcgtccatctcacagtcgattc
aagttcgaaccacgtcaaaccgagaaacaaccagtaaaaaagaccaaaagttccaatggg
attttttcggggctcaaaattgacaatctcttttccaactttggaaatgaatttaaacga
gctgtatctactcctaaagcagcaaaaaaaccaacgtatcaagaattcaacacaccagta
gatcgaccaaaatctcgatcaacgtcgtttgaaaaacctccttcaactaatgacgagtta
gaagacatgcgtgagatacatcaagatttgcaacagaaatgtttgttttgcgccgataag
ttagaagcgaatattcgattgttacagcatcacctagtggataaaagttccaatgagggt
tcagttaaagaagagaatggacattgtggtgtcacgaagaaaaaggaagaagtgttttta
gcgctggcgagtttaaaacaagttcgtgatattctccgcggctcattaaatctcaaccaa
tcagcaaacagcaaggagatcacaaacatagaaaacttaaaatctcgtctcgaggacctt
cccctgcctccacttgaaagtccgaaaaatctaaacaacgagggtgacttacccaccgaa
gcaacccttcaataa
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