Ciona intestinalis (yellow sea squirt): 100184542
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Entry
100184542 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100184542
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100184542
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100184542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
WDR55
zf-rbx1
WD40_CDC20-Fz
Beta-prop_EML_2
zf-RING_5
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
zf-Nse
EIF3I
zf-RING_11
zf-UDP
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
zf-ANAPC11
WD40_WDHD1_1st
Beta-prop_SPT8
ANAPC4_WD40
WD40_Prp19
CENPH
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100184542
NCBI-ProteinID:
XP_002123329
Ensembl:
ENSCING00000001593
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MASFLRLVEDNNSSDDEEMFPLSNQPSTVPETSRNRQFSIVTVSDNDLPQNEAATRAVRW
LISNVTANSASRESSSNLSNQRRTIDLTSDNPDEDWGNNDDTENADSILGLSEDSSPILG
WVRPGRAPFRLHVASSEESEAGTLVEGDASDSEVSNQDSERSSETSRLEEDGVPSDASSS
TLTNSAVLPEPEFPTPVLPQPELPTPVLPQPELPTPVLPQPELPTPVLPQPELPTPVLPQ
PELPTPVLPRPILEPVLTDALQGNELASQQDFLSSSRWKQHNKRKLSSPSEACSPKKVKE
NSQGSESDDEMNCPICFEPWTNSGKHRLVSLKCGHLFGQKCVERWLKECHQKCPQCNVKA
KKSEVRVIYAKKLKAVDTSELENAIKVADKVKAEKREREMELAKVRMQYEMAMEECNRLK
SKVTVLMDNQPTHPTTTSQQQSSNQTNNGKFFQLYKNIVITPSGGCRVMDFDKRSCQFVI
SQPSPRSRFMTGFGVKRLSGMDFKSGCFTLLHQKVIKDLRFNPLCENQLLSASQDGTLRI
TDMLSNSKVHEYKVGKPVWSCCWDTNNRNIIYSGLNNGSFMQFDLRNTSEAMSTMENTWS
RCPVVSLYHVPPTANDKFQGRGGLFSATLKGACFWQDTMESTEESTSFISNFKPTFLPLE
TGSCAGLCYNPSTNHCLVTFRPGGSYRKTTHLLGELQSMVGTDGGKRISCNIVETFYGGQ
THKMLTRNSLHVLPLNGGDTLLACVGDEPNKKVQVYDVNRNKLVQCLPCDNAPPLDILNT
NISNRNVIAALTDTTLKVFALD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtttctacgtttagttgaagataataattcctctgatgatgaagagatgttc
ccgttgtccaaccaaccatctactgtccctgaaacaagcaggaatcgacaattttcgatt
gtaacggtttccgacaatgatttaccacaaaacgaagcagccacgcgtgctgttagatgg
cttataagcaacgtgactgcgaactcagcttcaagggagtcatcgtccaatttatcgaac
caacgacgcacaattgaccttacttcagacaaccccgatgaagattgggggaacaacgat
gacactgaaaatgctgactcaatattaggtttatctgaggattcctcccccatattaggt
tgggtgcggccaggtcgagccccgttcaggttacatgtggcgtcctcagaggaaagtgaa
gccggtacattggtggagggagatgcatccgatagcgaagtttccaatcaagacagtgaa
agatcgagtgaaacatcaaggttggaggaagatggagttcccagtgatgccagttcatca
acattaactaattctgcagtgttgccggaaccagagtttccaacaccagtgttgccgcaa
ccagagttaccaacaccagtgttgccgcaaccagagttaccaacaccagtgttgccgcaa
ccagagttaccaacaccagtgttgccgcaaccagagttaccaacaccagtgttgccgcaa
ccagagttaccaacaccagtgttaccccgaccgatattagaaccagtattgactgatgca
ttacaaggcaatgagctcgcatcacagcaagacttcttatcctcctcacgatggaaacaa
cacaacaagaggaagctttcctcaccttctgaggcgtgtagtccgaagaaagtgaaagag
aattcccaaggaagcgaatcagatgatgagatgaattgtcccatatgttttgaaccatgg
actaatagtgggaaacatagactcgtttcattgaagtgtggtcacttgtttggtcagaaa
tgcgttgaacgttggttgaaggaatgccatcagaagtgcccgcagtgtaatgtgaaggct
aagaaatctgaggttcgagtgatttacgcaaagaaactgaaagctgtcgatacatcggag
ctggaaaacgcaataaaggttgccgataaagtgaaagcagagaaacgtgaacgagaaatg
gagcttgctaaagtaagaatgcaatatgagatggctatggaagaatgtaatcgactcaaa
agtaaagttaccgttctaatggacaaccaacccacccacccaacaaccacaagccaacaa
caatcatccaatcaaacaaacaacgggaaattcttccaactttataaaaacatcgtcatc
accccatcaggaggttgtagagtgatggactttgataaaaggtcgtgtcagttcgtgatc
tcgcaaccaagtcctcgttcaaggttcatgacaggttttggggtgaagagattaagtgga
atggattttaaaagtggttgtttcacgttgttgcatcagaaggttataaaagatcttcgt
ttcaatcctttgtgtgagaatcaactgttgtcggcctcgcaggatggaacccttcgtatt
actgacatgttaagcaactccaaagttcacgaatacaaagttgggaaaccagtgtggagc
tgttgttgggacactaacaatagaaacattatatattctgggctcaataatggctccttc
atgcagtttgatcttcgtaatacctcggaagccatgtctaccatggaaaacacatggtcc
agatgccccgtagtttccctctaccacgtaccacccacagccaacgacaaattccagggt
cgcggtggtttgttcagcgctacgttgaagggggcgtgcttctggcaagatacgatggaa
tccacggaagaatcgacttctttcatctccaacttcaaaccaacattcctcccccttgaa
actggtagctgtgcaggtctatgttacaacccatcaaccaatcactgtcttgtgacattt
agaccaggtggtagttacaggaagacaacccacttgcttggtgagctacagtcaatggtt
ggaaccgatggtgggaaaagaataagttgtaatattgtggagacattttatggaggtcaa
acacataagatgttgaccaggaattccttgcatgtgttgccattgaatggaggtgataca
ttacttgcttgtgttggagatgaaccaaacaagaaggtccaggtatacgacgtgaacagg
aacaagttggtccaatgcttgccgtgcgacaatgctcctccacttgatattttaaacact
aatatctctaataggaatgtaatagctgccctgacagacacaactttaaaagtttttgcg
ttggattaa
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integrated database retrieval system
