KEGG   Ciona intestinalis (yellow sea squirt): 100184605
Entry
100184605         CDS       T01056                                 
Name
(RefSeq) U6 snRNA phosphodiesterase-like
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100184605
Spliceosome [BR:cin03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100184605
SSDB
Motif
Pfam: HVSL DUF4796_C 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 100184605
NCBI-ProteinID: XP_002131286
Ensembl: ENSCING00000011490
UniProt: F6WVC9
LinkDB
Position
2:complement(3176514..3177941)
AA seq 262 aa
MNSLEMLGEYSSSSDEESISISKTNTASSQKSKLVVPDAICALYATEQTEHNDPTKHQGR
VRSFQHVKGNWATFLYIPYPNPHCNELRSYVEDLLQFQGLDHWKIVDDFHLSVSRTSAIP
HHFIEPLVEGIQGCAQKLSPVILNFSCDLKFYVNDEKTRSFCGFEVTSPFILAKLQTLVD
HINKPLKDYKCDSYYENPSFHISISWTLGNIFEQNWKKQLEIFQTHWSEVFIESPELFSF
EANNLVCKCGNRLFTFEISYKS
NT seq 789 nt   +upstreamnt  +downstreamnt
atgaactcgctagaaatgcttggagagtacagtagtagttctgatgaggaatcaatttca
atcagtaaaactaatactgcgagctctcaaaagtcaaagctggttgtcccggacgcaata
tgtgctttgtatgccacagaacaaacggagcacaacgatccgaccaaacatcagggacgt
gtaagatcttttcaacatgtgaaaggaaattgggccactttcctttacattccttacccc
aatccccattgtaatgagctgagatcttacgttgaagatttgttgcaatttcaaggctta
gatcattggaaaatagttgatgatttccacctgagcgtgtctcgaacttctgcgattcca
catcattttattgaacctcttgttgagggaattcaaggctgtgcccagaaattgtctcca
gttattttaaatttttcttgtgatttgaaattttatgtcaatgatgaaaagacaagatct
ttttgtggatttgaggtcacatcacctttcattcttgccaagttacagacccttgtggac
cacataaacaaaccattaaaagattacaagtgcgacagctattatgagaacccttccttc
cacataagtatatcttggacacttggaaatatctttgaacaaaattggaaaaagcagctt
gagatatttcagacccattggtccgaagtgttcattgaatcaccagagttattttctttt
gaagcaaataatttagtttgtaaatgtggaaatcgacttttcacgtttgaaataagctac
aaatcttga

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