Ciona intestinalis (yellow sea squirt): 100184611
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Entry
100184611 CDS
T01056
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein H2-like isoform X1
KO
K12898
heterogeneous nuclear ribonucleoprotein F/H
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100184611
Spliceosome [BR:
cin03041
]
Complex C
Other components
hnRNP proteins
100184611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_11
RRM_1
DUF8400
RRM_3
Motif
Other DBs
NCBI-GeneID:
100184611
NCBI-ProteinID:
XP_002122500
Ensembl:
ENSCING00000001798
LinkDB
All DBs
Position
1
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AA seq
420 aa
AA seq
DB search
MTEERYVVRLRGLPWAATEAEVIKFLNVEVVGGEAGIRRTYTDDQRPSGEAFVEVTSQKS
LQTCFEKDHQLIGKRYIEVFESSVKEMEYVLGLSEEEIGSSAQADVFVRLRGLPFQCSKE
EVAQFFSGLEIVPNGITLPLDDNGRSTGEAYVEFGSPESAEKALTKHKEKIGHRYIEIFK
SSKRELMESQGEYMDDERGFGSRGRPGPYDRPNRGGRGSRGQRWLRGGSRYAGGGGGGYG
GGDYCEDDWEGNWRNNRGRGRGGMKPYGNRYNNSGGYGGNYGGGNYGGGNFQEDYGYNGD
ENYGEEFYEEEASPSQFVVRMRGLPFKCQEQDVFNFFSPLVPVRVNIEYSDDGRVTGEGT
VFFASYQDAQAAMQKNKECIQHRYIELFLRSNRRDGGFRSGGQRRRGRGGGGGGGGGYRF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaaagatacgttgttcgattgcgtggattaccgtgggcagccacagaagct
gaggtcattaaatttttgaatgttgaagttgttggtggtgaagctggaattcgaagaact
tacacagatgatcagcgaccaagtggagaagcttttgtagaggttacatcgcaaaagagc
ttgcaaacatgctttgaaaaagatcatcagctgattggaaaacgatacatagaagtgttt
gaatcaagtgtaaaggagatggaatatgttcttggattatcagaagaggaaattggttct
tctgcccaagctgatgtcttcgtccgcctacgaggacttccttttcagtgctccaaggaa
gaagttgctcaatttttctctgggttggaaatcgtgccaaatgggatcacgctaccgtta
gatgacaatgggcgaagcacgggggaggcttatgttgagtttgggtcgccagaatcggct
gagaaagctttgacaaaacataaagagaagattgggcacaggtacattgagatcttcaaa
agttcgaaacgtgagttaatggaatcacagggtgaatatatggacgatgaaaggggtttc
gggtcacggggtcgaccgggaccctatgatcgacccaaccgtggtgggcggggttcaagg
ggtcaacgatggttaagaggtggttcacgttatgctgggggtgggggtggaggttatggt
ggtggtgattattgtgaagatgattgggaagggaattggaggaacaacagaggtcgaggt
agaggaggaatgaagccatatggcaatcggtacaacaactctggtggttatggtggaaat
tatggcggtggaaattacggtggaggaaattttcaagaagattatggttataatggtgat
gagaattatggagaggagttttatgaagaagaagcttctccatcacaatttgtggtccgg
atgagaggtcttccttttaagtgccaggaacaggatgtttttaattttttttcacccctt
gtgccagtaagagtaaatatcgagtacagcgatgatggtcgagttaccggtgaaggaact
gtgttttttgcctcttatcaagatgcacaagctgccatgcagaagaacaaggagtgtatt
cagcacagatacattgagttgttcttgaggagcaacagacgtgatggaggattcagaagt
ggaggacagagaagaagaggaagaggtggtggtggtggtggtggtggtggttacagattc
tga
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